KEGG   Variovorax boronicumulans: CKY39_02235
Entry
CKY39_02235       CDS       T05068                                 
Name
(GenBank) dicarboxylate--CoA ligase PimA
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vbo  Variovorax boronicumulans
Pathway
vbo00061  Fatty acid biosynthesis
vbo00071  Fatty acid degradation
vbo01100  Metabolic pathways
vbo01212  Fatty acid metabolism
vbo02024  Quorum sensing
vbo04146  Peroxisome
Module
vbo_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CKY39_02235
   00071 Fatty acid degradation
    CKY39_02235
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CKY39_02235
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CKY39_02235
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vbo01004]
    CKY39_02235
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vbo04147]
    CKY39_02235
Enzymes [BR:vbo01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CKY39_02235
Lipid biosynthesis proteins [BR:vbo01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CKY39_02235
Exosome [BR:vbo04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CKY39_02235
  Exosomal proteins of breast cancer cells
   CKY39_02235
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ATA52170
UniProt: A0A250DCV1
LinkDB
Position
complement(489870..491588)
AA seq 572 aa
MATPSLSGDPTPWTRNYPSGMRWDADLPVKPVQQMLDEAVARWPDHSAVEFMGQVLTYAQ
LGAAVDRAAKGLQDLGVKPGVHVGLYLPNTPHYPIAFFAVLKAGGTVVNYSPLDAERVLA
HKIEDSRTDILVTLDLVNLYPLMARLLDSSRLKTLVVGSLCDYGAAGDKVQAQLQAAGQI
APVPTDDRHVRFTDLLKSEGTHQTYPLGDLAEEIVVLQYTGGTTGLPKGAMLTHANLTSA
SAQYYESTRGEPPILDEGKERFLVVLPLFHIFALSAAMLLGVRLGAALVLHTRFDVDAVM
NELAASKISVFPGVPTMYTAILSHPKAKEMDLRSLKFCGSGGAPLPVEVEQRFFELTGCH
LNEGWGMTETSPVGTFTPARGVRKAGSCGMPLPRVRIKLVSLDDPTKDVTAFGEPGELCV
QGPNVMKGYWNNPKATAESMTADGYFRSGDVAKMDADGYLYIVDRTKDMLLCGGYNVYPR
VLEEAVYEHPSVAEVCVIGVPDEYRGQSPKAFVKLKDGAGDLTLDALKSFLKNRLGKHEM
IGALEIRAELPKTAVGKLSKKDLVDEEARKRA
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggcgaccccttccctctctggcgaccccaccccctggacgcgcaactacccgtccggc
atgcgctgggacgccgacctgcccgtcaagccggtgcagcagatgctcgacgaagcggtc
gcgcgctggcccgaccattcggccgtggagttcatgggccaggtcctcacctatgcccag
ctcggcgcagcggtcgaccgcgccgccaagggcctgcaggacctgggcgtgaagccgggc
gtacatgtcggcctgtacctgccgaacacgccgcactacccgatcgccttcttcgccgtg
ctcaaggccggcggcacggtggtgaactactcgccgctggacgccgagcgcgtgctggcc
cacaagatcgaggacagccgcaccgacatcctcgtcacgctcgacctcgtgaacctgtat
ccgctgatggcgcgcctgctcgacagctcgcgcctgaagacgctggtggtcggcagcctc
tgcgactacggcgcggcgggcgacaaggtgcaggcccagctgcaggccgcgggccaaatc
gcaccggtgcccaccgacgaccggcacgtgcgcttcaccgacctgctcaagagcgaaggc
acgcaccagacctatccgctgggcgacctcgccgaagagatcgtcgtgctgcagtacacc
ggcggcaccaccggcctgcccaagggcgcgatgctcacgcacgccaacctcacgtcggcc
tcggcgcagtactacgaatcgacgcgaggcgagccgccgatcctcgacgaaggcaaggag
cgcttcctggtcgtgctgccgctgttccacatcttcgcgctcagcgccgcgatgctgctg
ggcgtgcgcctgggcgcggcgctggtgctgcacacgcgcttcgatgtcgatgcggtgatg
aacgaactcgcggccagcaagatcagcgtgttccccggcgtgccgacgatgtacaccgcc
atcctttcgcaccccaaggcgaaagaaatggacctgcgctcgctgaagttctgcggctcg
ggcggcgcgccgctgccggtggaggtggagcagcgcttcttcgaactcaccggctgccac
ctcaacgaaggctggggcatgaccgagacctcgcccgtgggcaccttcacgcccgcgcgc
ggcgtgcgcaaggcgggctcgtgcggcatgccgctgccgcgcgtgcgcatcaagctcgtg
agcctggacgacccgacgaaggacgtgaccgcgttcggcgagcccggcgagctgtgcgtg
cagggcccgaacgtcatgaagggctactggaacaaccccaaggccaccgccgaatcgatg
accgccgacggctacttccgcagcggcgacgtcgcgaagatggacgccgacggctacctg
tacatcgtcgaccgcaccaaggacatgctgctgtgcggcggctacaacgtgtacccgcgc
gtgctcgaggaggcggtgtacgaacacccgtcggtggccgaggtctgcgtgatcggcgtg
cccgacgagtaccgcggccagtcgccgaaggccttcgtgaaactgaaggacggcgcgggc
gacctcacgctcgacgcgctcaagagcttcctgaagaaccgcctgggcaagcacgagatg
atcggcgcgctcgagatccgcgccgagctgcccaagaccgccgtgggcaagctctcgaag
aaagacctcgtggacgaggaagcccgcaagcgggcctga

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