Variovorax boronicumulans: CKY39_02305
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Entry
CKY39_02305 CDS
T05068
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02010
ABC transporters
vbo02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKY39_02305
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CKY39_02305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_02305
Transporters [BR:
vbo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
CKY39_02305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ATA52183
UniProt:
A0A250DDW6
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All DBs
Position
504225..505856
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AA seq
543 aa
AA seq
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MTTQSSVSRRSQKLALLAPAALTALTLACGAVSAKTLVYCSEGSPENFYPGMNTTGTSFD
VTTQVYNTIVEFERGGTKVMPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFN
ADDFIFMLERQWKESDPFFKVTSQNHSYFNDMGMPKLLKSVDRIDDHTVKITLNQAEAPF
LANLAMQYAGIQSKEYAIAMLKAGTPEKVDQDPVGTGPFYLVQYQKDAIIRFKAFPQYWG
GKAKIDDLVFAITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGY
LSYNTTKKPFDDVRVRKAINMAINKKAIIDGVYLTTGVAAKNPIPPTLWSYNDAVKDDPY
DPEAAKKLLAQAGFPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKSFEW
GEYRKRLQAGEHQMGMLGWTGDNGDPDNFMYTLLGCASAKSASGSNISKFCYQPYEDLVV
KAKSATKQSERDALYKKAQVIFKEQAPWFTIAHAVQLKPVRKEVVDFKLSPFGRHTFYGV
DIK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccagtcctccgtttcgcgccgctcacaaaagctggcgctcctggcaccggca
gcgctcacggcccttaccctggcctgcggcgccgtgtcagccaagacgttggtgtactgc
tccgaaggaagcccggaaaacttctatccgggcatgaacaccaccggcacatcgttcgac
gtgaccacgcaggtctacaacaccatcgtcgagttcgagcgcggcggcaccaaggtcatg
ccgggccttgctgaaaaatgggacatctcggccgacggcaccgtgtacaccttccacctg
cgcaagggcgtgaagtggcacaccacgagcaagagcttcaagcccacgcgcgacttcaac
gccgacgacttcatcttcatgctcgagcgccagtggaaggagagcgaccccttcttcaag
gtcacgagccagaaccactcctacttcaacgacatgggcatgcccaagctgctgaagtcg
gtggaccgcatcgacgaccacacggtgaagatcacgctcaaccaggccgaggcgccgttc
ctggccaacctggcgatgcagtacgcgggcatccagtcgaaggagtacgccatcgcgatg
ctgaaggccggcacgcccgagaaggtcgaccaggacccggtcggcaccggcccgttctac
ctcgtgcagtaccagaaggacgcgatcatccgcttcaaggccttcccgcagtactggggc
ggcaaggccaagatcgacgacctcgtgttcgcgatcacgcccgatgcgtcggtgcgctgg
gccaagctgcaaaagggcgagtgccacgtcatgccgtacccgaacccggccgacctggac
gcgatccgcaaggacccgaacgtgcaggtgctggaacagcccggcctgaacgtcggctac
ctctcgtacaacacgacgaagaagcccttcgacgacgtgcgcgtgcgcaaggccatcaac
atggcgatcaacaagaaggccatcatcgacggcgtgtacctcacgaccggcgtggccgcg
aagaacccgatcccgcccacgctgtggtcctacaacgatgccgtgaaggacgacccgtac
gaccccgaggccgccaagaagctgctggcgcaagccggcttccccgacggcttcagcacc
gacctgtgggccatgccggtgcagcgcccgtacaacccgaacgccaagcgcatcgccgag
ctgatgcaggccgacctggccaagatcaacgtcaaggccgagatcaagagcttcgagtgg
ggcgagtaccgcaagcgcctgcaggccggtgagcaccagatgggcatgctgggctggacc
ggcgacaacggcgacccggacaatttcatgtacaccctgctgggctgcgcctcggccaag
tcggccagcggcagcaacatctcgaagttctgctaccagccgtatgaagacctcgtggtg
aaggccaagagcgcgaccaagcagtcggagcgcgatgcgctctacaagaaggcgcaggtc
atcttcaaggagcaggcgccgtggttcaccatcgcgcatgcggtgcagctgaagccggtg
cgcaaggaggtcgtcgacttcaagctgagccccttcggccgccacaccttctacggcgtg
gatatcaagtaa
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