Variovorax boronicumulans: CKY39_02420
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Entry
CKY39_02420 CDS
T05068
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo03030
DNA replication
vbo03430
Mismatch repair
vbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKY39_02420
03430 Mismatch repair
CKY39_02420
03440 Homologous recombination
CKY39_02420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vbo03032
]
CKY39_02420
03400 DNA repair and recombination proteins [BR:
vbo03400
]
CKY39_02420
Enzymes [BR:
vbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKY39_02420
DNA replication proteins [BR:
vbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKY39_02420
DNA repair and recombination proteins [BR:
vbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKY39_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ATA52203
UniProt:
A0A1E7TVQ1
LinkDB
All DBs
Position
533547..534617
Genome browser
AA seq
356 aa
AA seq
DB search
MQLASAQLGAHLQKGLKPLYTIHGDEPLLAQEAADAIRAAARAQGHTERSSYTVAGAHFD
WSAVLAAGGSLSLFADKQIVEIRIPSGKPGKDGSVALQQLAEGAPGNDSTLTLVMLPRLD
KATRTGAWFSALENNGVSIQVDPIERAALPQWIAQRLGLQNQRVMPGDEGQRTLQFFADR
VEGNLLAAHQEIQKLALLHPAGELSWEQVEGAVNNVARYDVFKLSEAVLAGNPQRVARML
DGLQAEGEAEVLVHYTIAEDIRALKRVKDAMAAGRPLPMALRENRIWGPRERAFERVLPR
LDDRMLTRLLRAAHLVDGICKGLKQPDWPASGWQALQRLALMLCRACSTAAAPRRA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgccagtgcccagctcggtgcccacctgcaaaagggcctgaagccgctttac
acgatccacggcgacgagccgctgctcgcgcaggaggcggccgacgccatccgcgccgcc
gcgcgcgcccagggccacaccgagcgcagctcgtacaccgtggccggcgcgcactttgac
tggagcgcggtgctggcggccgggggctcgctctcgctcttcgccgacaagcagatcgtc
gagatccgcattccctcgggcaagcccggcaaggacggcagcgtcgccctgcagcagctg
gccgagggcgcgcccggcaacgacagcacgctcacgctggtgatgctgccgcgcctggac
aaggccacgcgcaccggcgcctggttctcggcgctcgagaacaacggcgtgagcatccag
gtcgacccgatcgagcgcgccgcgctgccgcaatggatcgcccagcgcctggggctgcag
aaccagcgcgtgatgcccggcgacgaaggccagcgcacgctgcagttctttgccgaccgc
gtcgaaggcaacctgctcgccgcgcaccaggaaatccagaagctcgcgctgctgcacccg
gcgggcgagctgagctgggagcaggtcgagggcgccgtcaacaacgtggcgcgctacgac
gtgttcaagctctccgaggccgtgctggccggcaacccgcagcgcgtggcgcgcatgctc
gacggcctgcaggccgagggcgaggccgaggtgctggtgcactacacgatcgccgaggac
atccgcgccctcaagcgcgtgaaggacgccatggccgccggccgcccgctgccgatggcg
ctgcgcgagaaccgcatctggggcccgcgcgagcgcgccttcgagcgcgtgctgccgcgc
ctggacgaccgcatgctgacccggctgctgcgggcggcccacctggtcgacggcatctgc
aagggcctgaagcagcccgactggcccgccagcggctggcaggcgctgcagcggctggcg
ctgatgctgtgccgcgcctgcagcacggccgccgcgccgcgtcgcgcctga
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