Variovorax boronicumulans: CKY39_03455
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Entry
CKY39_03455 CDS
T05068
Name
(GenBank) fimbrial assembly protein
KO
K07347
outer membrane usher protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_03455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_03455
02044 Secretion system [BR:
vbo02044
]
CKY39_03455
02035 Bacterial motility proteins [BR:
vbo02035
]
CKY39_03455
Transporters [BR:
vbo02000
]
Other transporters
Pores ion channels [TC:
1
]
CKY39_03455
Secretion system [BR:
vbo02044
]
Chaperone-usher system
Type 1 pilus assembly protein
CKY39_03455
Bacterial motility proteins [BR:
vbo02035
]
Pilus system
Fimbrial proteins
CKY39_03455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
ATA52376
UniProt:
A0A250DDH3
LinkDB
All DBs
Position
778041..780656
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AA seq
871 aa
AA seq
DB search
MATHEGLEERRADRAAVVPCALAALLAMAASTQVRADTPAAATQPAEVRFNEDFLRLGNG
VPLDLSRYNKGNPAEAGRYRADLYVNQVWLGRSTVTLKAVGARSGDVATCFDRDLLERVG
IDLQRLSPEAVALLPGAVPSPRDCVALAQLVPDATAFFDNGEQRLDIGVPQAALRRQARG
HVDPSQWDDGVPAALLQYDANYYRSKTAGRSDSQGYVGLVAGGNIGPWRLRHHGSLTTGS
ARGTHYQGTQTYVQRAVEPWGSQLVVGDAFTEGALFDSFGFRGVQLATDDRMVPESQRGY
APRITGIARGNAVVRVRQNGNLLRETTVAAGAFVIDDLYPTGYGGDLDVEVTEADGSVQV
SKVPYAAAVNALRPGITRYRVTAGQLRDSQLHSRRALFQGTVQHGFTNALTGYGGVLLAR
GYRALVGGAALNTSWGAFGVDLTGAAASLSGQERRSGHSVRLAYTKILAPTDTHVTLAAY
RYSSKGYLGLREAVALGEAPGPSRGDGSGLPGGHLRGRLQLMLNQNLPGNMGSFYLSGST
QDYWNREGRDTQFQAGYSKSFGRVNLGLSAARQFDPLRKRWNNTVMLTFGIPLDAGSREV
YTTSSVQRDSSGAIDMRTSAGGVFGEDNAWSYSLNASHSSGGDGVSTSSRTGGGATVAHV
SPVATWRGSASAGEGYSQLGVGVSGGVVAHGGGVVFAPAMGETLAIVEATGANGARVANA
SGLRVGPGGQAVVSNLAPFASNEVELDPKGLPMSVELKSSTQRVAPTAGAVVKLKFETSG
GGRSVLVRVTLADGTPVPFGARVTDAAGQEVGTVAQDGRLLLRSVAVDAAQYELAWGEEK
GQRCSLPLLLGAVPTDAPASPWQVIDARCAL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcatgaaggcctcgaagaacgccgtgcggaccgtgcggcggttgtcccctgc
gcgttggcggcgcttctggcgatggcggccagcacgcaggtcagggccgacacgccggcc
gccgcaacgcagcctgcggaagtgcgcttcaacgaagacttcctgcggctgggcaacggc
gtgccgctggacctgagccgctacaacaagggcaaccccgctgaggcggggcgctatcgc
gccgatctctacgtcaaccaggtctggctcgggcgcagcactgtcacgctgaaagccgtg
ggcgcgcgcagcggcgatgttgcgacctgcttcgaccgcgatctgctcgagcgtgtgggc
atcgatctgcaacggctgtcgcccgaagccgtggctctgttgccaggtgccgttccttcg
ccacgtgattgcgtggcgctggcccagctggtgcccgacgcgaccgcgttcttcgacaac
ggcgaacagcggctcgacatcggcgtgccgcaggcggcgcttcggcgccaggcgcgcggc
catgtggacccgagccaatgggacgacggcgtgcccgccgccttgctgcagtacgacgcc
aactactaccgctccaagaccgcaggacgctcggacagccagggctacgtgggcctggtg
gcgggcggcaacatcggcccctggcggctgaggcaccacggcagcctcacgaccggctcg
gcacgcggcacccactaccagggcacgcagacctacgtgcagcgcgccgtcgagccctgg
ggcagccagctggtggtgggcgacgccttcaccgagggcgcgctgttcgacagcttcggc
tttcgcggcgtgcagttggccaccgacgaccgcatggtgccggagtcgcaacgcggctat
gcgccgcgcatcacgggcatcgcccggggcaatgcggtggtgcgcgtgaggcagaacggc
aacctgctgcgcgagaccacggtggcggccggcgccttcgtgatcgacgacctgtatccc
acgggctacggcggcgacctcgacgtcgaagtcaccgaagccgacggcagcgtgcaggtg
tcgaaggtgccttatgcggccgcggtgaacgcgctgcgtcccggcatcacgcgttaccgc
gtgacggcgggccaattgcgcgattcacagctgcacagccggcgcgcgttgttccagggt
acggtgcagcatggcttcacgaatgcgctcacgggctacgggggcgtgctgcttgcacgc
ggctatcgtgccctggtgggtggggctgcgctcaacaccagctggggcgccttcggcgtc
gacctgaccggcgccgcggccagcctgtccgggcaggagcgccgaagcggccacagcgtg
cggctggcctacaccaagatcctggcgcccaccgacacccacgtcacgcttgcggcctac
cgctattcgagcaagggctacctgggtctgcgcgaagccgtggcgctgggcgaggccccg
gggccctcgcgcggcgacggcagcggcctgccgggcggacacctgcgcggccgccttcag
ctcatgctcaaccagaacctgccgggcaacatggggtcgttctacctgagcggctcgacc
caggactactggaatcgcgagggccgggacacgcagttccaggccggctacagcaagagc
ttcggtcgcgtgaacctcgggctctcggccgcccggcagttcgaccccttgcgcaagcgc
tggaacaacacggtcatgctgaccttcggcattccgctggacgccgggtcgcgtgaggtc
tacaccacgtcgagcgttcagcgcgattccagcggcgcgatcgacatgcgcacctccgca
ggcggcgtgttcggcgaagacaacgcgtggagctacagcctcaacgcgagccacagcagc
gggggcgacggggtgtcgacgtcgtcacgcaccggcggcggcgccacggtggcccatgtc
tcgcccgtcgccacctggcgcggcagcgcgtcggccggcgaaggctattcgcagctgggc
gtgggcgtgtcgggcggtgtggtggcccacggcggtggcgtggtgttcgcgcctgcgatg
ggcgaaacactcgccatcgtcgaggcgacgggcgcgaacggcgcgcgcgtcgccaatgca
agcgggttgcgtgtcgggccaggagggcaggccgtggtgtcgaacctcgcgccctttgcg
agcaacgaagtcgagctcgatcccaagggcctgccgatgagcgtggagctgaagtcgagc
acgcagcgcgtcgcacccacggcgggcgccgtggtcaagctgaagttcgaaacctcgggc
ggcgggcgctcggtgctcgtgcgcgtcaccctggccgacggcacgccggtgcccttcggc
gcgcgggtgacggacgcggcggggcaggaggttggcacggtggcgcaggacgggcggctt
ctgctgcgcagcgtggctgtcgacgccgcgcagtacgagctggcgtggggcgaggagaag
gggcagcgctgcagcttgccgctcttgttgggcgcggtgccgaccgatgcccctgcgtca
ccgtggcaggtgatcgacgctcggtgcgccctgtga
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