Variovorax boronicumulans: CKY39_03665
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Entry
CKY39_03665 CDS
T05068
Symbol
pgaB
Name
(GenBank) poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
vbo
Variovorax boronicumulans
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Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
GHL10
Motif
Other DBs
NCBI-ProteinID:
ATA57570
UniProt:
A0A250DT75
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Position
complement(826938..829004)
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AA seq
688 aa
AA seq
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MQAPTFFLRLRAALLGLLLATALPALAAPVLPADPDNGVDFRVISFHDVRPNVRASFETS
PDETAIDERTLAEVFAWLRHSGYHPVSLQQIIDARNGGKPLPSQPVLLTFDDGYRSAYTH
VFPLLQRFNYPALFALVTSWLEVPEGQPVHWGDKPAPRENFLLWREAAEMARSPLVEFAS
HTDAMHTGIQANPQGNMLPAAATHRYDPKTGRYEDDAAYLRRIETDLRRSRELIEKRTGA
KVRATVWPYGAYNTPALEASARVGMPITFTLDDGANTKEIPLSRIRRALAAYDNEAPDYV
QMLRSPVGGEVRPINRVMHVDLDYVYDADPAQQERNLSALIERVAAVRPRSVFLQAYADP
DGDGVADALYFPNRHLPMRADLFARAAWQLRSRTGVKVYAWMPVTAYRLPTSNPLATHTV
RTLKGDAPADRYHRLSPFDPAVRTLVGDLYEDLGRHTFFEGLLFHDDAMLSDDEDASPAA
LDTYRRWGLPADVAALRADPALMARWTAAKTRYLVDFTHELAARVGTWRPALETARNLYA
RPVLEPAAEQWFAQNYEASLAAYDYVGLMAMPRMEQEARTPADSDAWLGRLAQRAAATPH
GLDRTVFELQARDWRTGKPVADAELTRQWTLLQRAGVRHLGYYPDDFLNNQPSLETVRRA
ISVRSLLSRAPRRNHDAATLPPEGGKPR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcccccaccttcttcctccggctgcgcgcggccctgctcgggctgctgctggcg
acggcgttgcctgcactggcggcgccggtgctgcccgccgaccccgacaacggcgtcgac
ttccgcgtgatctcgttccacgacgtgcgccccaacgtgcgcgccagcttcgagacctcg
cccgacgaaaccgccatcgacgagcgcacgctcgccgaagtgttcgcctggctgcgccac
agcggctaccacccggtcagcctgcagcagatcatcgatgcgcgcaacggcggcaagccg
ctgccctcgcagcccgtgctgctgaccttcgacgacggctaccgcagcgcctacacgcac
gtgttcccgctgctccaacgcttcaactaccccgcgctgttcgcgctcgtgacgagctgg
ctcgaggtgcctgaaggccagcccgtgcactggggcgacaagcccgcgccgcgcgagaac
ttcctgctgtggcgcgaagccgccgagatggcgcgctcgccgctggtcgagttcgccagc
cacaccgacgcgatgcacaccggcatccaggccaacccgcagggcaacatgctgcccgcc
gcggccacgcaccgctacgacccgaagaccggccgctacgaggacgacgcggcctacctg
cgccgcatcgagaccgatctgcgccgcagccgcgaactgatcgagaagcgcaccggcgcc
aaggtgcgcgccaccgtgtggccctacggcgcctacaacacgcccgcgctggaagcctcg
gcgcgcgtgggcatgccgatcaccttcacgctcgacgacggcgcgaacacgaaggagatt
ccgctcagccgcatccgccgcgcgctggccgcctacgacaacgaggcgcccgactacgtg
cagatgctgcgcagtccggtgggcggcgaggtgcgcccgatcaaccgcgtgatgcacgtc
gacctggactacgtgtacgacgccgacccggcccagcaggagcgcaacctctcggcgctg
atcgagcgcgtggccgccgtgcgcccgcgctcggtgttcctgcaggcctatgccgatccc
gacggcgacggcgtggccgacgcgctgtactttcccaaccgccacctgccgatgcgcgcc
gacctgttcgcccgcgccgcctggcagctgcgcagccgcaccggcgtgaaggtctacgcc
tggatgcccgtcaccgcctaccggctgccgacgtcgaacccgctggccacgcacacggtg
cgcacgctcaagggcgacgcgccggccgaccgctaccaccggctctcgcccttcgacccg
gccgtgcgcacactggtcggcgacctgtacgaagacctgggccgccacaccttcttcgaa
ggcctgctgttccacgacgacgccatgctctcggacgacgaggacgccagccccgccgcg
ctcgacacctaccgccgctggggcctgccggccgacgtggccgcgctgcgcgccgacccc
gcgctcatggcccgctggaccgccgccaagacccgctacctggtcgacttcacgcacgaa
ctcgcggcgcgcgtgggcacctggcgccctgcgctggaaacggcgcgcaacctctacgcg
cggccggtgctcgaacccgcggccgagcaatggtttgcccaaaactatgaagcctcgctt
gccgcctacgactacgtcggcctgatggccatgccgcgcatggagcaggaggcccgcacc
ccggccgacagcgacgcctggctgggccgcctggcccagcgcgcggccgccacgccgcac
ggcctggaccgcaccgtgttcgagctgcaggcgcgcgactggcgcaccgggaaacccgtg
gccgacgccgagctcacgcgccagtggaccctgctgcagcgcgccggcgtgcgccacctg
ggctactaccccgacgacttcctgaacaaccagccctcgctggagaccgtgcgccgcgcg
atctcggtgcgttcgctgctgtcgcgcgccccccggcgcaaccacgacgccgccacgctg
ccacctgaaggagggaagccccgatga
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