Variovorax boronicumulans: CKY39_03670
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Entry
CKY39_03670 CDS
T05068
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
vbo
Variovorax boronicumulans
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_4
TPR_14
Motif
Other DBs
NCBI-ProteinID:
ATA52413
UniProt:
A0A250DEK5
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Position
complement(829013..831688)
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AA seq
891 aa
AA seq
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MSRPRRVHAKGSSVSIHPQKNGGTVVAGRKVAPFKALPHHLARAVRGLPPIVCVLVFGSS
TAYAESTVAPSPAAPLGSALAYDASQHDALIVARRAGRIAPAQALQQLRQWLAAPLADDQ
RRRVASDAIAIAVADGRFADAVAVGRQVPPGELGDYALGPLAGAARRTGDIALQGDTVKV
WRARQPAAREPRIHEAFWRLASGDTAGAQTIYRALAQPAPTEVADRVALLDLRAALARAQ
GQPFQALTAYGEITALQPQRRDAQRDADFLLAEYGGATAAFEDAQAAERKQPGSLAPLTL
ALLEQQALAQQLRWAVKARDQRLGAARVADLDKVLAAQSGALARVDAALAQPTPPDADTW
RTLRMRLQSDRMMALLERGRPADTIALYDSLRADGTALPPYALGTAARALAQERRSADAV
PLFEKAVVDLPMPDSLHFGLVYAYLDTGRFDDAEALLQRIESATPVLMRLAPEAGRPNDQ
FSEVSGLGALLQLYGDRPKIAQPRFNTLTQEAPLNAGYAYGAALTERLREHPEAAVARFE
ALSADHPDDLSVRTGHVEALLDADEFRAARIRAESLEVDAPDAAEVREMARKRRSLVGPQ
LEIDAEGSRGGGTLASREWRVDSRLSSGLIGDAWRVFYAQTLGRGYTSEGTAQWARGGLG
ASWQQGRWLAEGVLQHANSGRYRNSVAGRVDYRASDAWRLSATYDGDSKELPWKARAVPF
GAQAIGAREFGASAAYVVNESRRFDLQWRRLDFSDGNLRDGLDFGWRERWISTPRFQIET
RLGVDASRSRLQDVRYFSPSRDASAQLSVRGQWLTWKSDDRQFFQVLELGGGSYQQAGFG
SGPLWNVRYEHRWALGQKLTLRYGLTFGSHPYDGVREKQRGVFLNLSMPLQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacggcccaggagagttcacgcaaaagggagtagcgtgtccatccatccacaaaaa
aatggaggcaccgtcgttgccgggcgcaaagtcgcgcccttcaaggcattgcctcaccat
ctcgcacgagccgtgcggggtttgccgccgatcgtgtgcgtgctggtcttcggaagcagc
accgcgtacgcggaatccactgtcgcgccctcgccggccgcccccctgggcagcgcgctg
gcgtatgacgcctcgcagcacgacgccctcatcgtcgcgcgccgcgccggccgcatcgcg
ccggcccaagccctgcaacagctgcgccaatggctggcggcgcccctggccgacgaccag
cgccggcgcgtggcgtccgacgccatcgcgatcgcggtggccgacggccgcttcgccgac
gcggtggccgtgggccgccaggtgccgcccggcgagctgggcgattacgcgctcggcccg
ctggccggcgccgcgcggcgcacgggcgacatcgccctgcaaggcgacaccgtcaaggtc
tggcgcgcgcgccagcccgcggcccgcgaaccgcgcatccatgaagccttctggcgcctg
gccagcggcgacacggcgggcgcgcaaaccatctaccgcgcactcgcacagcccgcaccc
accgaggtcgccgaccgcgtcgcgctgctcgacctgcgcgccgcgctggcgcgtgcccag
ggccagccgttccaggcgctcacggcctacggcgagatcaccgcgctgcagccccagcgc
cgcgatgcacagcgcgacgccgacttcctgctggccgagtacggcggcgccaccgctgcg
ttcgaggacgcgcaggcggccgaacgcaagcagcccggcagcctcgcgccgctgacgctc
gcgctgctcgaacagcaggcgctggcgcagcagctgcgctgggccgtgaaggcgcgcgac
cagcgcctgggcgcggcgcgcgtcgccgacctcgacaaggtgctggccgcccagagtggc
gcgctggcccgggtcgacgccgcgctcgcgcagcccaccccgcccgacgccgacacctgg
cgcacgctgcgcatgcggctgcagtccgaccgcatgatggcgctgctggagcgcggccgt
cccgccgacaccatcgcgctgtacgacagcctgcgtgccgacggcaccgcgctgccgccc
tacgcgctgggcaccgccgcccgcgcgctggcgcaggagcgccgctcggccgatgccgtg
ccgctgttcgagaaggcggtcgtcgacctgccgatgcccgacagcctgcacttcggcctg
gtctacgcctacctggacaccggccgcttcgacgacgccgaggcgctgctccagcgcatc
gaaagcgccacgcccgtgctgatgcggctggcgccggaagccggccgcccgaacgaccag
ttctccgaagtgagtggcctgggcgcattgctgcagctctacggcgaccgcccgaagatc
gcgcagccgcgcttcaacacgctcacgcaggaagccccgctcaacgcgggctacgcctac
ggcgccgcgctcaccgagcggctgcgcgagcaccccgaggcggccgtggcgcgcttcgag
gcgctgagcgccgaccaccccgacgacctgagcgtgcgcaccggccatgtcgaagcgctg
ctcgacgccgacgaattccgcgcggcccgcatccgtgccgagtcgctcgaggtcgacgcg
cccgacgccgccgaggtgcgcgagatggcgcgcaagcgccgctcgctggtcggcccgcag
ctcgagatcgatgccgaaggttcgcgcggcggcggcacgctggccagccgcgaatggcgc
gtcgacagccggctcagctccggcctcatcggcgatgcatggcgcgtgttctacgcgcag
acgctgggccgcggctacacctccgaaggcacggcccagtgggcgcgcggcggcctcggc
gcgagctggcagcaaggccgctggctggccgaaggcgtgctgcagcatgcgaacagcggg
cgctaccgcaacagcgtggccggccgcgtcgactaccgcgccagcgatgcctggcgcctg
tcggccacctacgacggcgacagcaaggagctgccctggaaagcccgcgccgtgcccttc
ggcgcgcaggccatcggcgcgcgcgagttcggcgccagcgcggcctacgtcgtcaacgag
tcgcgccgcttcgacctgcaatggcgccggctcgacttcagcgacggcaacctgcgcgac
ggcctcgacttcggctggcgcgagcgctggatcagcaccccgcgcttccagatcgagacg
cggctgggcgtcgatgccagccgcagccgcctgcaggacgtgcgctacttcagcccctcg
cgcgacgccagcgcgcagctgtcggtgcgtggccagtggctcacctggaaaagcgacgac
cgccagttcttccaggtgctggagctcggcggcggcagctaccagcaggccggcttcggc
agcggcccgctgtggaacgtgcgctacgagcaccgctgggccctgggccagaagctcacg
ctgcgctatggcctgaccttcggcagccacccctacgacggcgtgcgcgaaaaacagcgc
ggcgtgttcctgaacctttcgatgcccctgcagtga
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