Variovorax boronicumulans: CKY39_03755
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Entry
CKY39_03755 CDS
T05068
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00521
Streptomycin biosynthesis
vbo00523
Polyketide sugar unit biosynthesis
vbo00541
Biosynthesis of various nucleotide sugars
vbo01100
Metabolic pathways
vbo01110
Biosynthesis of secondary metabolites
vbo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CKY39_03755 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CKY39_03755 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CKY39_03755 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CKY39_03755 (rfbB)
00525 Acarbose and validamycin biosynthesis
CKY39_03755 (rfbB)
Enzymes [BR:
vbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CKY39_03755 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Cellsynth_D
Motif
Other DBs
NCBI-ProteinID:
ATA52427
UniProt:
A0A250DDI7
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Position
847730..848809
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AA seq
359 aa
AA seq
DB search
MILVTGGAGFIGANFVLDWIAQGNEPVVNLDKLTYAGNLETLASLKGNANHVFVQGDIGD
SALLDRLLAEHKPRAVVNFAAESHVDRSIHGPEDFVQTNVLGTFRLLESVRGYWNALPAD
QKAAFRFLHVSTDEVYGSLSKTDPAFTEENKYEPNSPYSASKAASDHLVRAWHHTYGLPV
VTTNCSNNYGPFHFPEKLIPLMIVNALAGKNLPVYGDGMQVRDWLYVKDHCSAIRRVLEA
GKLGETYNVGGWNEKPNIEIVNTVCALLDELSPRADGKPYKEQITYVTDRPGHDRRYAID
ARKLEAELGWKPAETFDTGIRKTVQWYLANGEWVRNVQSGAYREWVEKQYDAAPAKASA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggttaccggcggcgcaggcttcattggcgccaatttcgtgctcgactggatc
gcgcagggcaacgagcccgtcgtgaacctcgacaagctgacctacgcgggcaacctcgag
accctcgcgtcgctcaagggcaacgcgaaccacgtcttcgtgcagggcgacatcggcgac
agcgcactgctcgatcgcctcctggccgagcacaaaccccgcgccgtcgtgaactttgcc
gcggaatcgcatgtggatcgttcgatccacggcccggaagacttcgtgcagaccaatgtg
ctcggcaccttccgcctgctcgaatcggtgcgcggctactggaacgccctgccggccgac
cagaaggcggccttccgcttcctgcacgtgtcgaccgacgaggtctacggctcgctctcc
aagaccgacccggccttcaccgaagagaacaagtacgagcccaacagcccgtactcggcc
agcaaggccgccagcgaccacctcgtgcgcgcctggcaccacacctacggcctgccggtg
gtcaccaccaactgctcgaacaactacggcccgttccacttccccgagaagctgatcccg
ctgatgatcgtcaacgcactggccggcaagaacctgcccgtgtacggcgacggcatgcag
gtgcgcgactggctctacgtgaaggaccactgcagcgccatccgccgcgtgctcgaggcc
ggcaagctcggcgagacctacaacgtcggcggctggaacgagaagcccaacatcgagatc
gtcaacaccgtgtgcgcgctgctcgacgaactgagcccccgcgccgacggcaagccgtac
aaggaacagatcacctacgtcacggaccgcccgggccacgaccgccgctacgccatcgat
gcacgcaagctcgaggccgaactcggctggaagcccgccgagaccttcgacaccggcatc
cgcaagaccgtccagtggtacctcgccaatggcgagtgggtgcgcaacgtgcaaagcggc
gcgtaccgcgaatgggtcgagaagcagtacgacgccgcacccgcaaaggcttccgcatga
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