Variovorax boronicumulans: CKY39_03770
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Entry
CKY39_03770 CDS
T05068
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00521
Streptomycin biosynthesis
vbo00523
Polyketide sugar unit biosynthesis
vbo00541
Biosynthesis of various nucleotide sugars
vbo01100
Metabolic pathways
vbo01110
Biosynthesis of secondary metabolites
vbo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CKY39_03770 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CKY39_03770 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CKY39_03770 (rfbC)
Enzymes [BR:
vbo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CKY39_03770 (rfbC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ATA52429
UniProt:
A0A1E7U682
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All DBs
Position
850619..851167
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AA seq
182 aa
AA seq
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MKVTQTAIADVLLIEPKVFGDARGFFFESFNQKAFDEAVGQRVDFVQDNHSRSTKGVLRG
LHYQVQQPQGKLVRVVRGAVFDVAVDIRRSSPTFGQWVGSELSEDNHRQLWVPPGLAHGF
LVLSESADFLYKTTDYYAPAHERCIAWNDPTLAIEWPDTGIAPKLSAKDAAAPTFLSAEI
PG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcacgcagacggccatcgccgacgtgttgctgatcgaacccaaggtgttcggc
gacgcacgcgggtttttcttcgagagcttcaatcagaaggctttcgacgaagccgtcggc
cagcgcgtcgacttcgttcaggacaaccactcgcgctccaccaagggggtcttgcgaggc
ctccattaccaggtgcagcaaccacagggaaaactggtgcgcgtggttcgaggggcggtg
ttcgacgtggcggtggacatccgccggtcgtcgccgaccttcgggcaatgggtgggcagt
gaactgtcggaagacaaccatcggcagttgtgggttccgccgggtctcgcgcacggcttc
ctggtgctcagcgagtcggctgattttctgtacaagacgacggactactacgcaccggcg
cacgagcgctgcattgcgtggaacgaccccacgttggcgatcgagtggcctgacacgggc
atcgcgccgaagctgtccgccaaggacgcggcagcgccgaccttcctgagcgccgaaatt
cccggctga
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