Variovorax boronicumulans: CKY39_04530
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Entry
CKY39_04530 CDS
T05068
Name
(GenBank) 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbo03009
]
CKY39_04530
Enzymes [BR:
vbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
CKY39_04530
Ribosome biogenesis [BR:
vbo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKY39_04530
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Methyltransf_31
MTS
Methyltransf_11
Methyltransf_25
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ATA52562
UniProt:
A0A250DE74
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All DBs
Position
1003239..1004453
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AA seq
404 aa
AA seq
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MKTLRLKPGKERSLQRRHPWVFESAIARGGADSGETVRVESHDGHFLAWAAFGPTSKIRA
RAWSFDEKQRIDAAFFSTVCARAVHARGLFDLQSDGVRLVHGEADGLPGLIVDRYGDTLV
AQFLSAGVERWKDVLADALLKATGLTRLYERSDASGREREGLKPVTGWLRGEGETQITIR
EHGWQLSLDIATGHKTGFYLDQRDSRQRFAELAQHRRFRRVLNCFCYTGGFTVAALAGLK
AAGALEGASLVSVDSSQPALERARAHLALNGFEGQGIATEFLDANVNTVLREFIDQGRTF
DAIVLDPPKFAPTVAHAERAARAYKDINRLALKLLEPGGVLLTFSCSGGISADLFHKIVA
SAGLDAGVDGYIAERLGAAPDHPMTIEFPEGEYLKGLVVVRKPL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctccgcctcaagccgggcaaggagcgctcgctccaacgccgccatccctgg
gtcttcgaatccgccattgcgcgcggcggcgcggactcgggggaaacggtgcgcgtggag
tcgcacgacggccactttctcgcgtgggcggccttcggcccgacctccaagatccgggcg
cgggcctggagctttgacgagaagcagcgcatcgacgctgcttttttttccacggtctgc
gcgcgcgcggtgcatgcgcgcggcctgttcgacctgcagagcgacggcgtgcggttggtg
cacggcgaggccgacggcctgccggggctgatcgtcgatcgctatggcgacacgctggtg
gcgcagtttctgtcggccggcgtggagcgctggaaagacgtgctggccgacgcgctgctc
aaggccacggggctcaccaggctgtatgagcgctccgacgccagcggccgcgagcgcgaa
ggcctgaagccggtcacgggctggctgcgtggcgagggcgaaacccagatcaccatccgc
gagcacggctggcagctgtcgctggacatcgcgaccggccacaagaccggcttctacctc
gaccagcgcgacagccgccagcgctttgccgagctggcgcagcaccggcgcttccgccgc
gtgctcaactgcttctgctacacgggcggcttcaccgtggccgcgctcgcgggcctgaag
gcggccggggcgctcgagggcgcctcgctggtgtcggtcgattcgtcgcagcccgcgctc
gagcgggcgcgcgcgcacctggcgctcaacggcttcgaagggcagggcattgccacggag
tttctcgatgccaacgtgaacacggtgctgcgcgagttcatcgaccagggccgcactttc
gacgccatcgtgctcgacccgccgaagttcgcgcccacggtggcgcacgccgagcgcgcc
gcgcgcgcctacaaagacatcaaccgcctggcgctcaagctgctggagcccggcggcgtg
ctgctcaccttttcctgctcgggcggcatcagcgccgacctgttccacaagatcgtggcc
tcggcggggctggacgccggtgtggacggctacatcgccgaacgcctgggcgccgcgccc
gaccacccgatgaccatcgagttcccggaaggggagtacctgaaggggctggtggtggtg
agaaagcccctgtga
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