Variovorax boronicumulans: CKY39_04840
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Entry
CKY39_04840 CDS
T05068
Name
(GenBank) two-component system response regulator GlrR
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_04840
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_04840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vbo02022
]
CKY39_04840
Two-component system [BR:
vbo02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
CKY39_04840
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA_16
FleQ
AAA_2
AAA
OKR_DC_1_N
AAA_3
HTH_8
MCM
TsaE
TIP49
Motif
Other DBs
NCBI-ProteinID:
ATA52614
UniProt:
A0A1E7U7B2
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All DBs
Position
complement(1075601..1076989)
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AA seq
462 aa
AA seq
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MSTAGARLLVVDDDPDMLRLLSMRLVSAGYQVTAVTSAETALTQLEIEHPQLVLSDVRLP
GRDGLQLFDEIRKRHPTLPVILLTAHGTIPDAVEATARGVFTYLTKPYDARELLEKIAQA
LALGAPTTTPSKTGDDSWRSEIVSRSNRMAELLAEARMVAKSDASVLLRGDSGAGKELLA
RAIHKASARADKPFVAVNCGAIPEALLESELFGHMKGAFTDAHANHKGLFQQADGGTLLL
DEIGDMPPALQVKLLRVLQERAVRPLGASQSIEVDVRIVSATHRDLDAAMEAGQFREDLY
YRLNVVTLTLPPLSARREDIPLLANHFLQKLSTKYGKRLSGFAPEALKALTTAAWPGNVR
QLYNVVEQVCALSGSPLIPLALVQRALRVPSVEVLTYAEAKQRFERDYLVGLLKLTDGNV
ADAARLADRNRTEFYRLLQKHELTPGNFKADVVAPGGDPVAE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagctggtgcccgcctcctcgtggtcgacgacgacccggacatgctgcggctg
ctctcgatgcggctggtgtcggcgggctaccaggtcacggccgtcacctcggccgagacc
gcgctcacgcagctcgagatcgagcacccgcagctggtgctcagcgacgtgcgcctgccc
gggcgcgacggcctgcagctgttcgacgagatccgcaagcgccacccgacgctgccggtg
atcctgctgaccgcgcacggcaccattcccgacgcggtcgaagccacggcgcggggcgtg
ttcacctacctcaccaagccctacgacgcgcgcgagctgctcgagaagatcgcgcaggca
ttggcgctcggcgcgccgaccaccacgccgagcaagaccggcgacgacagctggcgttcg
gaaatcgtgagccgcagcaaccgcatggccgagctgctggccgaggcgcgcatggtcgcc
aagtcggacgcctccgtgctgctgcgcggcgactccggcgccggcaaggagctgctggcg
cgcgccatccacaaggccagcgcgcgcgccgacaagcccttcgtggcggtcaactgcggc
gccattcccgaggcgctgctcgagtcggaactgttcggccacatgaagggcgccttcacc
gacgcccacgcgaaccacaagggcctgttccagcaggccgacggcggcacgctgctgctc
gacgaaatcggggacatgccgcccgcgctgcaggtcaagctgctgcgcgtgctgcaggag
cgcgcggtgcgcccgctgggcgccagccagtcgatcgaggtcgacgtgcgcatcgtctcg
gccacccaccgcgacctggacgccgcgatggaagccggccagttccgcgaagacctctat
taccgcctgaacgtggtgacgctcacgctgccgccgctgtcggcgcggcgcgaggacatt
ccgcttctggccaaccacttcctgcagaagctgtcgaccaagtacggcaagcggctgtcg
ggcttcgcgcccgaggcgctgaaggcgctgaccaccgccgcgtggccgggcaacgtgcgc
cagctctacaacgtggtggagcaggtctgcgcgctgtcgggctcgccgctgatcccgctc
gcgctggtgcagcgcgcgctgcgcgtgccgagcgtggaggtgctcacctatgccgaggcc
aagcagcgtttcgagcgcgactacctcgtcggcctgctcaagctgaccgacggcaacgtg
gccgacgcggcccgcctggccgaccgcaaccgcaccgagttctaccgcctgctgcagaag
cacgagctcacgccgggcaacttcaaggccgacgttgtcgctcccggtggtgaccctgtc
gccgagtag
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