Variovorax boronicumulans: CKY39_04875
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Entry
CKY39_04875 CDS
T05068
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_04875
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_04875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbo03000
]
CKY39_04875
Transcription factors [BR:
vbo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CKY39_04875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR_2
GntR
MarR
HTH_IclR
HTH_24
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
ATA52620
UniProt:
A0A1E7U6N5
LinkDB
All DBs
Position
complement(1085843..1086535)
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AA seq
230 aa
AA seq
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MKRTNPTPSAYASWDASQSLSAPWIDATHLGSFVTLEAGDTIAREGERHDYFYLLRSGFV
HSTIHRSNGAEFLLEIFGPGAIFGEGPAFADSPRPTTTRAVAPALLSRYRPADVAQQFSA
LPELATSLIQLLGFKNHMIVAKLAGVASAAPKERVIDLLLRVARPPSAQAPKQLTVDLTH
EQIGAMTALSRVTVTRTLNALAREGLIETRARQVGIPNAPALHRFRDATP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacgaatcccacgccctcggcgtacgccagttgggacgcctcccagtcgctg
tccgcgccgtggatcgacgccacgcacctgggaagcttcgtcaccctggaggccggcgac
accattgcgcgcgaaggcgaacggcacgattacttctatctcttgcggtcgggcttcgtg
cattccacgatccaccggagcaacggcgcggagttcctgctcgagatcttcgggccgggt
gcgatcttcggcgaaggcccggcgtttgccgacagcccccggccgacgacgacccgggcg
gtcgcaccggcccttctcagccgctaccgcccggcggatgtcgcgcagcagttttcggcg
cttcccgaactcgcgacctcgttgatccagctgctcggcttcaagaaccacatgatcgtc
gccaagctcgccggggtggcctcggcggcgcccaaggagcgggtcatcgacctgctgctg
cgggtggcgcgcccaccatcggcgcaggcaccgaaacaactcaccgtggacctgacgcac
gagcagatcggcgccatgacggccctgagccgcgtcacggtcacgcgcacgttgaatgcg
ctggcaagagaagggctcattgaaacgcgagcccggcaggtcggcatcccgaatgcgccg
gccctgcatcgtttccgcgacgcgacaccgtaa
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