Variovorax boronicumulans: CKY39_05770
Help
Entry
CKY39_05770 CDS
T05068
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00550
Peptidoglycan biosynthesis
vbo01100
Metabolic pathways
vbo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKY39_05770
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKY39_05770
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vbo01003
]
CKY39_05770
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vbo01011
]
CKY39_05770
Enzymes [BR:
vbo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CKY39_05770
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CKY39_05770
Glycosyltransferases [BR:
vbo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CKY39_05770
Peptidoglycan biosynthesis and degradation proteins [BR:
vbo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CKY39_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ATA52774
UniProt:
A0A250DES6
LinkDB
All DBs
Position
complement(1286427..1288769)
Genome browser
AA seq
780 aa
AA seq
DB search
MAVAFRVLGAGIAAAGLLSILCVVAVALAVAYPNLPDISELSDYRPKLPLRVFSAEGTQI
GEFGEERRNLTPIAAIPKVVKDAVLAAEDARFYDHGGVDYKGLVRAGLANLNRVKSQGAS
TITMQVARNVYLSSEKTLTRKIYEVLLTFKLEHLLTKDQIFEIYLNQIYLGNRAYGFAAA
SEAYFGKPLSEMTIAQAAMLAGLPKAPGANNPVNNPQRARGRQFYVIDRMQEAGFITAEQ
AAEAKKEELHLRDAADPNRLHAEYVAETVRQLMYAQYGDSTYTRGLKVYTSLVAADQAAA
YKALRKGIMDYERRQVYRGPEKFIDLPNDPKELDEAVDDVLNDHPDNGDVMAAVVLKATP
KEIQAIRANGDAVQITGDGLKPAQSGLSDKAPPNIKIRRGAVIRVAKTPKNTWEITQLPE
VEGAFVAMDPRDGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALEKGFTPAT
VINDGPLFFDAGTTGGQPWEPKNYGGGFDGPMSMRTALMKSRNLVSIRILQSIGTRYAQD
WITNFGFDKDKHPAYLPMALGAGAVTPMQMAVGYSVFANGGYRVNPYLVTRVTDHKDRVL
VDVQPPLLNEASRAIPQRNAFIMDTLLQSITRAGTAAKAQAMLKRPDLYGKTGTTNDSLD
AWFAGFQPTMTAISWIGYDTPRNLGDRETGGGLSLPIWINYMETALKGVPVTDLSTTPPS
GIVSVGGEWYYDDYAPGRGVSSLGVESSAPVAPAEALSGPAISAPAPPEERNRILDLFRN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgcgtttcgtgttctgggggcgggcatcgctgcggcgggcctgctttccatc
ctgtgcgtggtggccgtggccctggcagtggcctatcccaacctgccggacatctcggaa
ctctccgactaccgacccaagctgccgctgcgcgtgttctccgccgaaggcacgcagatc
ggcgagttcggggaggagcgacgcaacctcacccccatcgccgcgatccccaaggtcgtg
aaggacgccgtcctggccgccgaagacgcccgcttctatgaccacggcggcgtcgactac
aaggggctagtccgcgccggcctcgccaacctgaaccgcgtgaagagccagggcgcctcc
accatcacgatgcaggtggcccgcaacgtctacctgagctccgagaagacgctgacccgc
aagatctacgaagtgctgctgaccttcaagctggagcacctgctcacgaaggaccagatc
ttcgagatctacctgaaccagatctacctgggcaaccgcgcctacggtttcgcggccgct
tccgaagcctacttcggcaagccgctgtccgagatgacgatcgcccaggccgccatgctc
gccggcctgccgaaggcgcccggcgcgaacaacccggtcaacaacccgcagcgcgcgcgt
gggcgccagttctacgtgatcgaccgcatgcaggaggccggcttcatcaccgccgagcag
gcggccgaggccaagaaggaagagctgcacctgcgcgacgccgccgacccgaatcgcctg
cacgccgagtacgtggccgaaaccgtgcgccagctgatgtacgcccagtacggcgacagc
acctacacgcgcggcctcaaggtctacacctcgctggtcgccgccgaccaggccgcggcc
tacaaggcgctgcgcaagggcatcatggattacgagcgccgtcaggtgtaccgcggcccc
gagaagttcatcgacctgccgaacgaccccaaggagctcgacgaagcggtggacgacgtg
ctgaacgaccaccccgacaatggcgacgtgatggcggccgtggtgctcaaggccacgccc
aaggaaatccaggccatccgggccaacggcgacgccgtgcagatcacgggcgacggcctc
aagcccgcgcagtccggcctgtcggacaaggcaccgcccaacatcaagatccgccgcggt
gccgtgattcgtgtcgccaagacccccaagaacacctgggaaatcacccagctccccgag
gtggaaggcgcgttcgtggccatggacccgcgcgacggtgccatcaaggcgctggtcggc
ggcttcgacttcggcaagaacaagttcaaccacgtcacacaggcgtggcgccagccgggt
tcgagcttcaagcccttcatctactcggcggcgctcgaaaagggcttcactcccgccacg
gtcatcaacgacggcccgctgttcttcgacgccggcaccaccggcggccagccctgggag
cccaagaactacggcggcggcttcgacggtccgatgtcgatgcgcacggcgctgatgaag
tcgcgcaacctcgtgtcgatccgcatcctgcaatccatcggcacgcgctacgcgcaagac
tggatcaccaacttcggcttcgacaaggacaagcaccccgcctacctcccgatggcgctc
ggtgccggtgccgtcacgccgatgcagatggcggtgggctactcggtgttcgccaacggc
ggctaccgcgtgaatccgtacctcgtgacccgcgtcaccgaccacaaggaccgcgtgctg
gtcgacgtccagccgccgctgctcaatgaagcctcgcgcgccatcccgcagcgcaacgcc
ttcatcatggacacgctgctgcagtccatcacgcgcgccggcacggccgcgaaggcgcag
gcgatgctcaagcgccccgacctctacggcaagaccggcaccaccaacgactcgctcgac
gcctggttcgcgggcttccagcccaccatgacggcgatctcgtggatcggctacgacacg
ccgcgcaacctgggcgaccgcgaaaccggcggtggcctgagcctcccgatctggatcaac
tacatggaaaccgccctcaagggcgtgcccgtgaccgacctgtcgaccacgccgccttca
ggcatcgtgagcgtcggcggcgagtggtactacgacgactacgcgccgggccgcggcgtg
tcgagcctgggcgtggaatcctccgcgccggtggccccggccgaagccctgagcggcccg
gcgatcagcgcgcctgcgccacccgaggaacgcaaccgcatcctcgacctgttcaggaac
tga
DBGET
integrated database retrieval system
