Variovorax boronicumulans: CKY39_06175
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Entry
CKY39_06175 CDS
T05068
Name
(GenBank) ABC transporter permease
KO
K21393
TRAP-type transport system permease protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_06175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_06175
Transporters [BR:
vbo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKY39_06175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
CitMHS
DUF3865
DUF6142
Motif
Other DBs
NCBI-ProteinID:
ATA52840
UniProt:
A0A250DET9
LinkDB
All DBs
Position
complement(1375009..1376904)
Genome browser
AA seq
631 aa
AA seq
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MVHEPTFEAAPFIGAGPSANALSGIAGRADRVIGGAVEAVAALLVLAEICVLFAGVVSRY
VFHAPLVWSDELASLLFLWLSMLGAVVALRRGEHMRMTALLQKVTPSTRAMLDAFAIAAS
IAFLVLIVWPSIDYAHEESFIVTPALEISNAWRAAAIPASIGIMLVMALLRLLRVCTGRQ
IAVAMLGMAALVGAFWLAAPLFATLGKFNLVIFFVVVVAATVLSGVPIAFSFALATFGYL
ALTTRTPLLVMVGRLDEGMSHLILLAVPLFIFLGALIEMTGMARAMIQFLASLLGHVRGG
LSYVLIGAMYLVSGISGSEIADMAAIAPVLFPEMVKRGAKPGDLVALLSATGAQTETIPP
SIVLITIGSVTGISIAALFTGGLLPAVVLGAALCVVVWWRYRREDLSGVQRYSKREIGKL
LMVALPAVLLPFVIRAAVVEGVATATEVSTIGIVYSALVGLFVYRQFDWKRLKPMLIDTA
SLSGAIIFIVGCATAMAWGLTQSGFSQDLARIMGALPGGAYGFLAVSIVAFIVPGSVLEG
IPAIVLFGPLLFPIAKAAGVHEVHYAMVVIFSMGIGLFAPPFGVGYYGACAVSKVNPDEG
IRHIWGYIAAMLVGLVIVAAFPWFSTGFLKF
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgaacccactttcgaggcggcgcccttcatcggtgccggcccttcggccaac
gcgctgagcggcatcgccgggcgcgccgaccgcgtgatcggcggcgccgtcgaagccgtg
gccgcgctgctggtgctggccgagatctgcgtgctgttcgcgggcgtggtgtcgcgctac
gtgttccatgcaccgctggtgtggtcggacgagctcgcgtcgctcctcttcctctggctc
tcgatgctgggcgccgtggtggcgctgcggcgcggtgagcacatgcgcatgaccgcgctg
ctgcagaaggtgacgccttcgacgcgcgccatgctcgatgcgtttgccatcgcggcatcg
atcgcgttcctcgtgctcatcgtctggccctcgatcgactacgcgcacgaagagtcgttc
atcgtcacgcccgcgctggagatcagcaacgcctggcgcgccgcggccattccggcgagc
atcggcatcatgcttgtgatggcgctgctgcggctgctgcgcgtctgcacgggccgacag
atcgcggtcgcgatgctcggcatggccgcgctggtcggcgctttctggctcgccgcgccg
ctgttcgcgacgctgggcaagttcaacctcgtgatcttcttcgtggtcgtggtggccgcc
accgtgctctcgggtgtgcccatcgcgttctcgttcgcgctcgccaccttcggttatctg
gcgctcaccacgcgcacaccgctgctggtgatggtggggcggctcgatgaaggcatgtcg
cacctcatcctgctcgcggtgccgctcttcatcttcctgggcgcgctgatcgagatgacg
ggcatggcgcgcgccatgatccagttcctcgcgagcctgctgggtcatgtgcgcggcgga
ctctcgtacgtgctgatcggcgcgatgtacctggtgtcgggtatctcgggttccgagatc
gccgacatggccgcgattgcgccggtgctcttccccgagatggtcaagcgcggcgccaag
cccggcgatctggtggcgctgctctcggccaccggcgcgcagaccgagaccattccgcca
tcgatcgtgctcatcaccatcgggtcggtcacgggcatctcgatcgcggcgctgttcacg
ggcgggctgctgccggccgtggtgctgggcgcagcgctgtgcgtggtcgtgtggtggcgc
taccgccgcgaagacctgagcggtgtgcagcgctacagcaagcgcgagatcggcaagctg
ctgatggtcgcgctgcccgcggtgctgctgcccttcgtgatccgcgccgccgtggtcgag
ggcgtggccacggccaccgaggtctcgaccatcggcatcgtgtattcggcgctcgtgggg
ctgttcgtgtaccggcagttcgactggaagcgcctgaagccgatgctgatcgacactgcc
tcgctctcgggcgcgatcatcttcatcgtgggctgcgccacggccatggcctggggcctc
acgcagtctggtttctcgcaggacctggcgcgcatcatgggcgcgctgccgggcggggcg
tatggcttcctggccgtgtcgatcgtcgcgttcatcgtgccgggcagcgtgctcgagggc
attccggccatcgtgctgttcgggccgctcctcttccccatcgccaaggccgcgggcgtg
cacgaggtgcactacgcgatggtcgtgatcttctcgatgggcatcggcctcttcgcgccg
cccttcggcgtcggctactacggcgcgtgcgccgtgagcaaggtcaaccccgacgagggc
atccgccacatctggggctacatcgccgcgatgctggtgggcctggtgatcgtggccgcg
ttcccgtggttctcgaccggcttcctcaagttctga
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