Variovorax boronicumulans: CKY39_06975
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Entry
CKY39_06975 CDS
T05068
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vbo02044
]
CKY39_06975
02035 Bacterial motility proteins [BR:
vbo02035
]
CKY39_06975
Secretion system [BR:
vbo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CKY39_06975
Bacterial motility proteins [BR:
vbo02035
]
Pilus system
Pilus assembly proteins
CKY39_06975
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
ATA52979
UniProt:
A0A250DG80
LinkDB
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Position
complement(1552314..1553543)
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AA seq
409 aa
AA seq
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MATVASSRSQVTHKEFVFEWEGKDRNGKLVRGELRAAGENQVQAALRRQGVLASKIKKRR
MRSGKAIKPKDIAIFTRQLATMMKAGVPLLQSFDIVGRGNANPSVAKLLNDIRSDVETGT
SLSAAFRKFPKYFDNLYCNLVEAGEAAGILEDLLDRLATYMEKTEAIKSKIKSALMYPTS
VVVVAFVVVAIIMIFVIPAFKQVFTSFGADLPAPTLFVMAMSEFFVSYWWLIFGVLGGGI
YFFLQAWKRNERVQKVMDRLLLRIPVFGTLIEKSCIARWTRTLATMFAAGVPLVEALDSV
GGASGNSVYGDATAKIQQEVSTGTSLTTAMTNVNLFPSMVIQMTAIGEESGSIDHMLGKA
ADFYESEVDDMVAGLSSLMEPIIIVFLGVIIGGIVVSMYLPIFKLGQVV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtggcatcctcccgctcccaggtcacgcacaaggaattcgtcttcgaatgg
gaaggcaaggaccgcaacggcaagctggtgcgcggtgaacttcgcgccgccggggagaac
caggtgcaggcggccttgcgtcgccagggcgtactggcctccaagatcaagaagcgccgc
atgcgctcgggcaaggcgatcaagcccaaggacatcgcgatcttcacgcgccaactcgcg
accatgatgaaggccggggtgccgctgctgcagtccttcgacatcgtgggccgcggcaac
gcgaacccgagcgtcgccaagctgctgaacgacatccgcagcgatgtcgagaccggcacc
tcgctttcggccgcttttcgcaagtttccgaagtacttcgacaacctctattgcaacctg
gtggaagccggtgaggcggccggtattctggaggacctgctcgaccgcttggcgacctac
atggaaaagaccgaagcgatcaagtccaagatcaagtcggcattgatgtacccgacctcg
gtggtcgtcgtggccttcgtggtggtggcgatcatcatgatcttcgtgatccctgccttc
aagcaggtgttcacctcgttcggagccgacctgcccgcgcctacgctcttcgtgatggca
atgagcgagttcttcgtttcctattggtggctgatcttcggcgtgctcggtggtggcatc
tatttctttctgcaagcgtggaaacgcaatgagcgcgtccagaaggtcatggaccgcctg
ctgctgcgcattcccgtcttcggcacgctgatcgagaaatcctgcatcgcccgctggacc
cgcacgctcgccaccatgttcgcggccggcgtgccgctggtggaggcgctcgactccgtg
ggcggtgcatcgggcaactcggtctacggcgatgccaccgccaagatccagcaggaggtc
tcgaccggcaccagcctcacgacggccatgaccaacgtcaacctgttcccgtcgatggtg
atccagatgactgccatcggcgaggagtcgggctcgatcgaccacatgctcggcaaggcc
gctgacttctacgagtctgaagtcgacgacatggtcgccggcctctccagcctgatggag
cccatcatcatcgtgttcctgggcgtcatcatcggcggcatcgtggtgtcgatgtacctg
cccatcttcaagctcggccaggtcgtctga
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