Variovorax boronicumulans: CKY39_07775
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Entry
CKY39_07775 CDS
T05068
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CKY39_07775
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vbo01007
]
CKY39_07775
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vbo03016
]
CKY39_07775
Enzymes [BR:
vbo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CKY39_07775
Amino acid related enzymes [BR:
vbo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CKY39_07775
Transfer RNA biogenesis [BR:
vbo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CKY39_07775
Prokaryotic type
CKY39_07775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF7310
CEP63
DUF7491
TMF_TATA_bd
DUF3450
DUF16
HAUS-augmin3
Phage_GP20
WXG100
CCDC113_CCDC96_CC
ZapB
FapA
PRKG1_interact
Motif
Other DBs
NCBI-ProteinID:
ATA53121
UniProt:
A0A250DG57
LinkDB
All DBs
Position
1719874..1721205
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AA seq
443 aa
AA seq
DB search
MLDITLLRKDLASAVAGLEKRKKNQPYLDVSAFTALEAERKTLQTRTEEIQARRNTLNKQ
IGPLKAKGESVDALMAEVNALKAEQESQSKRLEEIQPELHALLLAVPNLPHASVPLGEDE
AGNVEMRRWAPQGGAGANATPLAFAPKDHVDLGAPLGLDFEMGAKLSGSRFTVMKGPIAR
LHRALAQFMVDLQTEQHGYTECYVPYVVNAATLSGTGQLPKFEGDLFAAKKGGQDGEPAP
DHSALYLIPTSEVPLTNFVRDEVVPEAQLPIKLTAHTPCFRSEAGSAGRDTRGMIRQHQF
DKVEMVQIVHPEKSYDALEQMTGHAEAVLQALELPYRVVLLCTGDMGFGSTKTYDLEVWL
PAQNTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGLAVGRALVAVLENHQN
EDGSINVPAALRPYLGGLEVLRG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacatcaccctgctccgcaaagacctggcctccgctgtggccggcctcgaaaaa
cgcaagaagaaccagccctacctcgacgtctcggcgttcaccgcgctcgaggccgagcgc
aagacgctgcagacccgcaccgaggaaatccaggcgcgccgcaacacgctgaacaagcag
atcggcccgctcaaggccaagggcgagtcggttgacgcgctcatggccgaggtcaacgcg
ctcaaggccgagcaggaatcgcagtccaagcgcctcgaagaaatccagcccgaactgcac
gcgctgctgctggccgtgcccaacctgccgcacgccagcgtgccgctgggcgaggacgaa
gccggcaacgtcgagatgcgccgctgggcgccccagggcggcgccggcgccaacgccacg
ccgctggccttcgcgcccaaggaccacgtcgacctcggcgcgccgctggggctcgatttc
gagatgggcgccaagctctcgggctcgcgcttcaccgtcatgaagggcccgatcgcccgc
ctgcaccgcgcgctggcccagttcatggtcgacctgcagaccgaacagcacggctacacc
gagtgctacgtgccctacgtggtcaatgccgccacgctcagcggcaccggccagctgccc
aagttcgaaggcgacctgttcgccgcgaagaagggcggccaggacggcgagcccgcgccc
gaccattcggcgctgtacctcatcccgaccagcgaagtgccgctgaccaacttcgtgcgc
gacgaggtcgtgcccgaggcgcaactgcccatcaagctcacggcccacacgccgtgcttc
cgctcggaagccggcagcgccgggcgcgacacgcgcggcatgatccgccagcaccagttc
gacaaggtcgagatggtgcagatcgtgcaccccgagaagagctacgacgcgctcgagcag
atgaccggtcacgccgaagccgtgctgcaggcgctggagctgccgtaccgcgtggtgctg
ctgtgcaccggcgacatgggtttcggttccaccaagacctacgacctcgaggtgtggttg
cccgcgcagaacacgtaccgtgagatcagctcggtgtcgaactgcgaagccttccaggcg
cgccgcctgcaggcccgtttcaagaacgcccagggcaagaacgagctggtgcacaccctc
aacggctccggcctggccgtgggccgcgcgctggttgccgtgctggaaaaccaccagaac
gaagacggctcgatcaacgtgccggcggcgttgcgtccgtacctcggcggcctcgaagtt
ttgcgcggttga
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