Variovorax boronicumulans: CKY39_09760
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Entry
CKY39_09760 CDS
T05068
Name
(GenBank) small-conductance mechanosensitive channel
Organism
vbo
Variovorax boronicumulans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3300
Motif
Other DBs
NCBI-ProteinID:
ATA53468
UniProt:
A0A250DGH9
LinkDB
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Position
complement(2149308..2151485)
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AA seq
725 aa
AA seq
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MTPSPHRPLLQRRLVASLCVAALFVAGCDKPAPPPPAAEAPATQAPAPVAAPVPAAYTPP
SAEQLYQLVAPIALYPDKLVAQILAGATYPDQITVAHGWLQQNPTLKAGPLADAANQQPW
DPSVKSLTAFRPVMDQMAGNIAWTTSLGKAYYNDPADVMNAIQVMRQRASKAGRLKNNDK
LRVARAATPPNYTPAPDMQPMYAGPTVIEAPEELITIEPVQPDVVYVPRYDPQVVYDTPV
AVYPGYAYAPPPVVIEPGYSRGQVAAVGALAFGSGVIVGSALERHGWGWNAWNMNWGAPR
WRDRAAPPPPAYRPAVVYNNSTYVSRSTTVVNNVRNVYNNNYAGDRSGPPTGAAAWQAAQ
QQEQLQQQARAQQQQQQALMQQQAAQNQLREQQQAQQEQARRQQQVQQEQALRQRQDQQE
QARRQQMQQQQAAQNQQRQQQAQQEQARRQQQMQQDQALRQRQDQQEQARRQQMQQQQAT
QDPQRQQQAQQKQARRQQQAQQEQALRQRQDPQEQARRQQMQQQQAAQDQQRQQRAQQEQ
ARRQQQAQQEQALRQRQDQQEQGRRQQMQQQQAQQEQLRRQQEQQQAQAAQQQQRLAQQE
QARRAQQMQQQAQQEQARRQQQLQQQQQAQAQAAQQQRQAQMEQARQMQMQQQQAAQAQQ
RQQQEQMQRQQMQQQQAAQNQARQQQHQQEQMQRQQAQQQQAQAQAAAAAAAAHRRRPGD
PNAPQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacaccctctccccaccgccccctccttcagcggcgcctcgtggcttcgctgtgcgtc
gcagcgttgttcgttgcaggctgcgacaagcccgcgccgccgcctcccgccgctgaagct
ccggccacccaggcccccgcgcccgtcgccgcgccggtgccggcggcctacacgccgcct
tcggccgagcagctctaccagctggtcgcgcccatcgcgctgtaccccgacaagctcgtc
gcgcagatcctggccggcgccacctaccccgatcagatcaccgtggcccacggctggctg
cagcagaaccccacgctcaaggccggcccgctcgccgacgccgccaaccagcagccgtgg
gacccgagcgtgaagtcgctcaccgcgttccggcccgtgatggaccagatggccggcaac
atcgcgtggaccacctcactgggcaaggcctactacaacgacccggccgacgtgatgaac
gcgatccaggtgatgcgccagcgcgcatcgaaggccggccgcctcaagaacaacgacaag
ctgcgcgtggcgcgcgccgcgacgccgcccaactacacgcccgcgcccgacatgcagccc
atgtacgcgggccccacggtgatcgaagcgcccgaagagctcatcaccatcgagcccgtg
cagcccgacgtggtgtacgtgccgcgctacgacccgcaggtcgtgtacgacacgcccgtg
gccgtctaccccggctatgcctatgcaccgccgccggtggtgatcgagcccggctacagc
cgtggccaggtggccgcagtgggcgcgctggccttcggcagcggcgtgatcgtcggctcg
gcactggagcgccacggctggggctggaacgcctggaacatgaactggggcgcgccgcgc
tggcgcgaccgcgcggcaccgccgccaccggcctaccggcccgcggtggtctacaacaac
agcacgtatgtgtcgcgctcgaccacggtggtcaacaacgtgcgcaacgtctacaacaac
aactacgcaggcgatcgcagcggcccgccgaccggtgcggcggcatggcaggcggcgcag
cagcaagagcagctgcaacaacaggcgcgtgcccagcagcagcagcaacaagcgctgatg
cagcagcaggcagcccagaaccagttgcgcgagcaacagcaggcccaacaggaacaggct
cggcgccagcaacaggtgcagcaggaacaggccttgcgccagcgccaggaccagcaggag
caggcccgtcgacagcagatgcagcagcaacaagcggcgcagaaccagcaacgtcaacaa
caggcgcagcaggagcaggcacggcgccagcagcagatgcagcaggaccaggccctgcgc
caacgccaggatcagcaggaacaagcccgtcgccagcagatgcagcaacaacaggccacg
caggacccgcagcgtcaacagcaggcccagcagaagcaggcacggcgccagcagcaagcg
cagcaggaacaggcactgcgtcagcggcaagacccgcaggagcaggcccgtcgacagcag
atgcagcaacagcaggccgcgcaagaccagcaacgtcaacaacgggcgcagcaggaacag
gcacgacgtcagcagcaagcgcaacaggagcaggcactgcgtcaacgccaggaccagcag
gagcagggccgccgccaacagatgcagcagcaacaggcgcaacaggagcagctacgtcgc
cagcaggaacagcagcaggcccaggccgcccagcaacagcaacggctggcacagcaggaa
caggctcggcgcgcgcagcagatgcagcagcaggctcaacaggagcaggcccgtcgccag
cagcagttgcaacagcaacaacaggcgcaagcccaggccgcgcaacagcaacgccaggct
cagatggaacaggcgcgccagatgcagatgcaacagcagcaagccgcccaggcccagcaa
cgccagcagcaggagcagatgcagcgccagcagatgcaacaacagcaggcggcgcagaac
caggcccgccagcagcagcaccaacaggaacagatgcaacgccagcaggcgcaacagcag
caagcccaggctcaggccgcagcggcggcggctgccgcccatcgccgccgcccgggcgat
cccaacgcaccgcagtga
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