Variovorax boronicumulans: CKY39_10105
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Entry
CKY39_10105 CDS
T05068
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
vbo
Variovorax boronicumulans
Pathway
vbo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CKY39_10105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vbo03011
]
CKY39_10105
Ribosome [BR:
vbo03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CKY39_10105
Bacteria
CKY39_10105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_9
Motif
Other DBs
NCBI-ProteinID:
ATA53529
UniProt:
A0A250DHU6
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All DBs
Position
complement(2221032..2222720)
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AA seq
562 aa
AA seq
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MSESFADLFEESLKRSEMRSGEVITAEVVRVEHNHVVVNAGLKSEAYVPIEEFKNDKGEL
EVQAGDFVSVAIGSVENGYGDTILSRDTAKRLASWLALEKALESGDFVTGTTSGKVKGGL
TVLVNGIRAFLPGSLIDTRPIKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGE
ERAKLMETLKEGAVVRGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVQAGQE
ITAKILKFDTEKNRVSLGLKQMGDDPWMGVSRRYPQSTRLFGKVTNIADYGAFVELEPGI
EGLVHVSEMDWTNKNIAPNKIVSLGDEVEVMVLEIDEDKRRISLGMKQCKANPWQEFAQN
TKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNETGETAVRNYKKGQEVEAIVL
AVDVDRERISLGIKQLDSDPFTTFTTVNDKGQIVTGKVKTVDARGAEIDLGEDIIGYLRA
SEISRDRVEDARNVLKEGDEVTAIVVNVDRKTRNIQLSIKQKDMVDEQGAMASLSQQSAR
ENAGTTSLGALLRAKLDNSDNK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttttgccgacctattcgaagagtccctgaagcgttccgaaatgcgcagc
ggcgaggtcatcaccgccgaagtcgtgcgtgtcgaacacaaccacgtcgtcgtcaacgcc
ggtctgaagtccgaagcgtatgtgccgatcgaagagttcaagaacgacaagggcgaactc
gaagtccaggccggcgatttcgtttccgttgccatcggcagcgttgaaaacggctacggc
gacaccatcctctcgcgcgacaccgccaagcgtctggcttcgtggctcgccctcgagaag
gccctggaatcgggcgacttcgtcaccggcaccaccagcggcaaggtcaagggcggtctc
accgtcctggtcaacggcatccgcgcgttcctgccgggctcgctgatcgacacgcgtccg
atcaaggacctgaccccgtacgaaaacaagaccctcgaattcaaggtcatcaagctcgat
cgcaagcgcaacaacgtcgtgctgtcgcgtcgtgccgtggtcgaagccagcatgggcgaa
gaacgcgccaagctgatggaaaccctgaaggaaggcgctgtggtccgtggcgtggtcaag
aacatcaccgaatacggtgcgttcgtggacctcggcggcatcgacggcctgctgcacatc
accgacatggcatggcgccgtgtccgccacccgagcgaagtcgttcaggccggccaggaa
atcaccgccaagatcctcaagttcgacaccgaaaagaaccgtgtctcgctgggtctcaag
caaatgggtgacgacccgtggatgggcgtttcgcgccgctacccgcaatcgacccgcctg
ttcggcaaggtcacgaacattgccgactacggcgcgttcgtcgaactcgaacccggcatc
gaaggcctggtgcacgtctccgaaatggactggaccaacaagaacatcgctccgaacaag
atcgtctcgctgggcgacgaagtcgaagtcatggtcctggaaatcgacgaagacaagcgc
cgcatcagcctgggcatgaagcagtgcaaggccaacccgtggcaagagttcgcgcaaaac
accaagcgcggcgaccgcgtcaagggcccgatcaagtcgatcaccgacttcggcgtgttc
gtgggtctggctgccggcatcgacggcctggttcacctgtcggacctctcgtggaacgaa
accggcgaaaccgccgttcgcaactacaagaagggccaggaagtcgaagcgatcgtgctg
gctgtcgacgtcgaccgcgaacgcatctcgctgggcatcaagcagctcgacagcgatccg
ttcaccacgttcaccaccgtgaacgacaagggccagatcgtgaccggcaaggtcaagacc
gtggacgcccgcggcgctgaaatcgacctcggcgaagacatcatcggctacctgcgtgct
tcggaaatctcgcgcgaccgcgtcgaagatgcccgcaacgtgctcaaggaaggcgacgaa
gtcacggccatcgtggtgaatgtggatcgcaagacccgcaacatccagctgtcgatcaag
cagaaggacatggttgacgaacaaggcgccatggccagcctgagccagcagtcggcacgc
gaaaacgcgggcacgaccagcctgggcgccctgctgcgcgccaagctcgacaacagcgac
aacaagtaa
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