KEGG   Variovorax boronicumulans: CKY39_10135
Entry
CKY39_10135       CDS       T05068                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
vbo  Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vbo03032]
    CKY39_10135
   03400 DNA repair and recombination proteins [BR:vbo03400]
    CKY39_10135
Enzymes [BR:vbo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CKY39_10135
DNA replication proteins [BR:vbo03032]
 Prokaryotic type
  DNA Topoisomerases
   CKY39_10135
DNA repair and recombination proteins [BR:vbo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CKY39_10135
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: ATA53533
UniProt: A0A250DHV6
LinkDB
Position
complement(2228749..2231394)
AA seq 881 aa
MTSFAKETLPISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFQDNYDGSEKEPKVLPSQLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLYLLRNPQASIDELMEIVPAPDFPTAGIIYGINGVKDGYRTGRGKV
VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLIEVFLQHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRSWDSKLV
REMLTRSRADGGVINADDYRPEGLEREYGMGGDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKDVMAEIDDLLDILAKPERVSIIIGDELGEIKQEFGQSKIGARRSLVEHSAYDL
STEDLITPTDMVVTLSHSGYIKSQPLGEYRAQKRGGRGKQATSTKDDDWIDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGEKRNFPADQ
YVFMATSMGTVKKTALNEFSNPRKGGIIAVNLDEGDYLIGAALTDGKHDVMLFSDNGKAV
RFDEEDVRPLGRNARGVRGMSLEPGQGVIAMLVAEDEQQSVLTATENGYGKRTSITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRELGRATQGVT
LIGLDEGAKLSGLQRIVENDANGEGEPDADDTSTSSTENPQ
NT seq 2646 nt   +upstreamnt  +downstreamnt
atgacctccttcgccaaagaaaccctgcccatcagtctcgaagaggaaatgcgcagcagc
tacctcgattacgccatgagcgtgatcgtcggccgggcgcttcccgacgcccgcgacggc
ctcaagccggtgcaccggcgcgtgctgtacgcgatgcacgagctcaacaacgactggaac
cggccctacaagaagtcggcccgtatcgtcggcgacgtgatcggtaagtatcacccgcac
ggcgaccagtcggtctacgacaccatcgtccggctggcccaggacttctcgatgcgccac
atgctggtcgacggccagggcaacttcgggtcggtcgacggcgacaacgccgccgcaatg
cgttatacggaaatccggctggccaaaattgcgcatgaaatgctggccgatatcgacaag
gaaactgtcgactttcaggacaattacgacggctccgaaaaagaaccgaaagttttgccc
agccagctgccgaatttgctggtcaatggctccggcggtattgcggtcggcatggccacc
aatatcccgccgcacaacctgaatgaagtggtggatgcctgcctgtatctgctgcgcaat
ccgcaggcgagcatcgacgagctgatggaaatcgtgccggcgcccgacttccccaccgcc
ggcatcatctacggcatcaacggcgtgaaggacggctaccgcaccggccgcggcaaggtc
gtgatgcgcgccaagtgccacttcgaggacatcgaccgtggccagcgccaggcgatcatc
gtcgacgagctcccctaccaggtcaacaagaagacgctgcaggagcgcatggccgagctg
gtgcacgagaagaagatcgaaggcatcagccacatccaggacgagtccgacaagtcgggc
atgcgcctggtgatcgagctcaagcgcggcgaagtgcccgaggtcgtgctcaacaacctc
tacaagcagacgcagctgcaggacaccttcggcatcaacatggtggcgctggtcgacggc
cagcccaagctgtgcaacctgaaggacctgatcgaggtcttcctgcagcaccgccgcgaa
gtcgtcacgcgccgcaccgtcttcacgctgcgcaaggcccgcgaacgcggccacgtgctc
gaaggcctggcggtggcgctggcgaacatcgacgagttcatccgcatcatccgcgagtcg
cctaccccgccggtcgccaaggccgagctcatgacccgcagctgggacagcaagctggtg
cgcgaaatgctcacgcgttcgcgcgccgacggcggcgtgatcaacgccgacgactaccgc
cccgagggcctcgagcgcgagtacggcatgggcggcgacggcctgtaccgcctgtcggaa
acgcaagcgcaggaaatcctgcagatgcgcctgcagcgcctgaccggcctcgagcaggac
aagatcgtcgccgagtacaaggacgtcatggccgagatcgacgacctgctcgacatcctg
gccaagcccgagcgcgtctcgatcatcattggcgacgaactgggcgagatcaagcaggag
ttcggccagtcgaagatcggcgcgcgccgcagcctggtcgagcacagtgcctacgacctc
tcgaccgaagacctgatcacgccgaccgacatggtcgtcacgctctcgcacagcggctac
atcaagagccagccgctgggcgagtaccgcgcgcaaaagcgcggcgggcgtggcaagcag
gccacgtccaccaaggacgacgactggatcgatcagctcttcatcgccaacacgcacgac
tacatcctgtgcttctccaaccgcggccggctgtactggctcaaggtgtgggaagtaccg
gcgggttcgcgcggttcgcgcggacgccccatcgtcaacatgttcccgctgcaggaaggc
gagaagatcaacgtcgccctcgccctcaccggcgagaagcgtaacttcccggccgaccag
tacgtgttcatggcgacctcgatgggcacggtcaagaagacggcgctcaacgaattcagc
aacccgcgcaagggcggcatcattgccgtgaacctcgatgaaggcgactacctcatcggc
gcggcgctcaccgatggcaagcacgacgtgatgctcttcagcgacaacggcaaggccgtg
cgcttcgacgaggaagacgtccgcccgctgggccgcaacgcccgcggcgtgcgcggcatg
tcgctggagcccggccagggcgtgatcgccatgctggtggccgaggacgagcagcagagc
gttctcaccgccaccgaaaatggttacggaaaacgcacaagcattaccgaatacacgcgt
catggccgcggaaccaaaggcatgatcgcgattcaacagagtgagcgcaacggcaaggtc
gttgccgccacgctcgttcatgcggacgatgagatcatgctcatcaccgacaagggtgtg
ctcgtgcgcacccgtgtggccgagattcgcgaactgggtcgggcgacgcaaggcgtcacg
ctgatcgggctcgacgaaggcgccaaactcagcgggcttcaacgcatcgtcgaaaacgac
gcgaacggcgaaggtgagccggacgcagacgacacttccacatcttcaacggagaatcct
cagtga

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