Variovorax boronicumulans: CKY39_10475
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Entry
CKY39_10475 CDS
T05068
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
vbo
Variovorax boronicumulans
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Ortholog
Paralog
GFIT
Motif
Pfam:
Autotransporter
PATR
AC_1
Lysis_col
Motif
Other DBs
NCBI-ProteinID:
ATA53594
UniProt:
A0A250DH51
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Position
2305954..2309199
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AA seq
1081 aa
AA seq
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MAISPASGTAATLHTDAGVSARISAPIVDGATGNRLVVGGAGLLTLTGASTYTGGTTLHS
GALEATGNGLGTGTLTINGGILARTDVGNHVRVNGNFGVTGSTTLSGLVELGADTRVTAT
AAAGSTSTTGMFAGPISGAGGLTFDSDLSTSTPGLFYLFGASDNSYTGTTTARSNVRLIL
ARQPGHIAVPGDFVIEGTASVSESYSEQIADSARVTVNSPGVLAAPGEFGGTTPVLFEGL
MVHPTLGLDVLTETIGSLHGTGTVGLGSGTLRVGSGEFGGQISNGGYATWFATVGGPAAN
GKLVKYGPGTLTLSGDNSYTGGTTIEGGTLQVGNGGTSGSLTGDVANSGILAFNRSNAST
FAGAISGSGSVQQLGAGRTTFTGAHTYTGGTTVQAGTLALSGAGRLADAGALRLAGSGAT
FDLSAADGDRQIGALSGVASSIVALGARRLTVDQSGNSSFAGSIHGSGGLTKTGAGALTL
AGASDYSGGTALKQGRLNLGHSSALGTGELAMDDGTTLGFSADGLTLANAIRMTGNNDPV
IDTGSFSQTISGAISGGGFLTKEGTGTLTLSGANIYTGATDVARGTLRAGASHTLSAASA
HTVAAGATLDLAGFSQRVAGLTNAGTVSLHGSTPGTVLTVTGPWVGQGGTLALGTVLGGN
GSPSDKVLLSGASAVASGTTKVRISNLGGLGARTTGNGIEVVGTEGGARIEGQAFALAAP
VAAGAYEYQLKTTSSGAYLSNSLPAPDPVPPSTVPTVPTYRTEVPLYAALPEQLRQANLA
MLGSMHQRTGDDGAGSVRGADAEQGRRQAWGRILTLDREIQQGGTVGPSSKGRLTGFQAG
TDLWADPNWRAGLYVGQLEGDIRVNGFARGLAGLAVGRNDLRSEYLGGYLTYRTDNGLYV
DGVLQAGRHRTTLDTLEPSLGGASKSSSLLASIEVGQSFALGAGWSMEPQLQLVHQRLSL
DNGVIVGSQVQQDTPGSWAVRAGLRVKGEFAVSTGTLQAYARLNVWHRDSGTDRTRFIGP
AAFADIVTPTGGSSAEAAVGATWQISPMVGVYGELGQLWGSGGNTRAEGGPNASLGMKVR
W
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggctatcagtccggcctcgggcacagcagccacgctgcacacggacgccggggtcagc
gcccgcatcagcgcgcccatcgtggatggcgcgacaggcaaccggctggtcgtggggggc
gccggcctgctgacgctgacgggcgccagcacctacaccggcggcaccacgctccacagt
ggcgcgctggaggccacaggcaacggtctgggtacgggcacgctcaccatcaacggcggc
atccttgcgcgcaccgatgtgggcaaccacgtgcgggtgaatgggaatttcggagtgacc
ggcagcaccacgctgtcaggcctcgtggagctgggcgccgacacccgggtcaccgccacg
gctgcggccgggtccacttcgacgacgggcatgttcgctggtcccatctccggcgcgggc
ggcctgaccttcgacagtgatctctcaacctcaacccccggcttgttctatctcttcggc
gccagcgacaacagctacacaggcacgacgacggcacgctccaacgtgcggttgatcctg
gcgcgccagcccgggcacattgccgtgccaggcgatttcgtgatcgagggcacggcctcg
gtgtccgagtcatattccgaacagatcgccgattccgcgcgggtcacagtcaacagcccc
ggggtgctcgcagcgcccggcgaattcggcggaacgacgcccgtgctgttcgaaggcctg
atggtgcaccccacgctgggcctggacgtcctcaccgaaaccatcggctcgctgcatggc
acgggcacggtcggccttgggtcgggcactttgcgtgtcgggtcgggcgagttcggcggc
cagatctcgaacggtggctatgccacgtggtttgccacggtcggcggtcccgccgccaac
ggcaagctcgtcaagtacggccctggcacgctcacgctgagcggggacaacagctacacg
ggcggcaccaccatcgaaggcggcacgctgcaggtgggaaatggcggcaccagtggctcg
ctcacgggtgatgtggcgaacagcggcatcctcgccttcaaccgcagcaacgccagcacc
tttgctggtgcgatcagcggcagcggctcggtgcagcaattgggcgctggccgcacaacc
ttcacgggcgcccacacctacaccggcggcaccacggtgcaggcgggcacgctggcgctg
agcggcgcgggcagactcgctgatgcgggggcgctgcgcttggcgggcagcggcgcgacg
ttcgaccttagcgctgctgatggtgatcgccagattggcgcactcagtggcgtggcaagc
agcatcgtggcactgggcgcgcgccgactcaccgttgaccaaagtggcaacagcagcttt
gcgggcagcatccacggtagcggaggtctcaccaagaccggcgccggggccttgaccctg
gcgggcgccagcgactacagcggcggcacggccctcaagcaaggccgcttgaacttgggc
cacagcagtgcgttgggcacgggtgaacttgccatggacgacggcaccacgctgggcttc
agcgccgatggcctgacccttgccaacgcgatccgcatgaccggcaacaacgaccccgtc
atcgacaccggcagcttcagccagacaatctcgggcgccatcagcggcggcggctttctg
accaaggagggtacgggcacgctgacgctcagcggcgccaacatctacacgggcgccacc
gacgtagcccggggcaccctgcgcgcgggggcgagccacacgctcagcgcggcctcggcg
cacaccgtcgccgccggcgccacgctggacctcgcgggcttcagtcagcgcgtggcgggc
ctgaccaacgccgggaccgtgagcctgcacggcagcacgcctggcacggtgctgaccgtc
actggcccttgggtcgggcagggcggcacgctggccctgggcacggtgctgggcggcaat
ggcagcccgagcgacaaggtgcttctcagtggcgccagcgcggtggccagcggcacgacc
aaggtacggatctccaacctcggcggcctgggcgcacggaccacaggcaacggcatcgag
gtggtgggcaccgaaggtggcgcgcgtatcgagggccaggctttcgcgctggcggctccg
gtggctgccggagcctacgagtaccagttgaagaccacgtcaagcggtgcctacctcagc
aacagtcttccggctcccgacccagtccccccttcgactgtgccgaccgtgcccacctac
cgcaccgaagtgccgctgtacgcggccctgcccgagcagctgcgccaggccaatctggcc
atgctgggcagcatgcaccagcgcacgggcgacgacggcgcgggtagcgtgcgcggtgcc
gatgcagaacagggccggcgtcaggcgtggggccgcattctgacgttggaccgcgaaatc
cagcagggcggcacggtcggcccctccagcaaagggcgtctgaccggcttccaggccggc
actgacctgtgggctgatccgaactggcgcgcgggcctgtacgtgggccagttggagggg
gatatacgagtcaacggcttcgcgcgcggtctcgcgggcctcgcggtcgggcgcaatgac
ttgagaagcgaatacctgggcggctacctcacctaccggaccgacaacggcctgtacgtg
gacggcgtgctgcaggccggccgccaccgcaccacgctggacactctggagccatcgctg
ggcggcgcaagcaagagcagcagtctgttggcttcgatcgaagtcggccagtcctttgct
ctgggtgcgggctggtcgatggaaccgcagttgcaactggtgcaccagcgcctgagcctg
gacaacggcgtcatcgtgggctcgcaggtgcagcaggacacgcccggcagctgggccgtg
cgcgcgggtctgcgtgtgaagggcgagttcgcggtcagcaccggtacgttgcaggcctat
gcgaggttgaacgtctggcacagggacagcggcacggaccgcacgcgcttcatcgggccg
gcggctttcgcggacatcgtcacgcccacgggcggcagcagcgccgaagcagcggtgggc
gccacctggcagatcagcccgatggtgggggtgtacggcgaactgggtcagttgtggggc
tcgggcggcaacaccagggccgagggcggacccaatgccagcctcggaatgaaagttcgc
tggtaa
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