Variovorax boronicumulans: CKY39_11030
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Entry
CKY39_11030 CDS
T05068
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbo03009
]
CKY39_11030
Enzymes [BR:
vbo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CKY39_11030
Ribosome biogenesis [BR:
vbo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CKY39_11030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
zf-C2H2_fungi_2
Motif
Other DBs
NCBI-ProteinID:
ATA53687
UniProt:
A0A250DH19
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Position
2435832..2436572
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AA seq
246 aa
AA seq
DB search
MHLQDILYTQGFGTRRVCAGLVQQGHVSIAGAVVTDPFADLDPEGLLFTVQGTEWACHEK
AYLMLHKPAGTECSQKPSTYPSIYTLLPSPLRLRPNKGAVQGVQAIGRLDQDTTGLLLLT
DDGQFIHKMGSPKHHVPKVYEVTAKHPIDETQIAKLLAGVVLDDDPKPVRAAACESDSPL
HLRLTLTEGKYHQVKRMLAAVGNRVEGLHRSRIGGLALPDDLAPGQWRWLTAEQVAQLRA
PVPRAA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgcaagacatcctctatacccagggcttcggcacccgccgcgtgtgcgcgggc
ctggtccagcaaggccacgtgagcatcgccggcgcggtcgtgaccgaccccttcgccgac
ctcgaccccgaaggcctgctgttcaccgtgcagggcaccgagtgggcctgccacgagaag
gcctacctgatgctgcacaagccggccggcaccgagtgctcacagaagccctcgacctac
ccgagcatctacacgctgctgccgtcgccgctgcgcctgcggcccaacaagggcgcggtg
cagggcgtgcaggccatcggccggctcgaccaggacacgaccggcctgctgctgctgacc
gacgacggccagttcatccacaagatgggctcgcccaagcaccacgtgcccaaggtctac
gaggtgacggccaagcacccgatcgacgagacgcagatcgccaagttgctggccggcgtg
gtgctcgacgacgacccgaagcccgtgcgcgcggccgcctgcgaatcggacagcccgctg
cacctgcggctcacgctcaccgaaggcaagtaccaccaggtcaagcgcatgttggccgcg
gtcggcaaccgggtcgaaggactgcaccgctcgcgcatcggcggcctggcgctgccggac
gacctggcgccggggcaatggcgctggctcacggccgagcaggtggctcagctgcgggcg
cccgtgccccgggccgcttga
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