Variovorax boronicumulans: CKY39_12195
Help
Entry
CKY39_12195 CDS
T05068
Name
(GenBank) modification methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00270
Cysteine and methionine metabolism
vbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
CKY39_12195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbo03000
]
CKY39_12195
03032 DNA replication proteins [BR:
vbo03032
]
CKY39_12195
03036 Chromosome and associated proteins [BR:
vbo03036
]
CKY39_12195
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
vbo02048
]
CKY39_12195
Enzymes [BR:
vbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
CKY39_12195
Transcription factors [BR:
vbo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
CKY39_12195
DNA replication proteins [BR:
vbo03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
CKY39_12195
Chromosome and associated proteins [BR:
vbo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
CKY39_12195
Prokaryotic defense system [BR:
vbo02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
CKY39_12195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ATA53893
UniProt:
A0A250DIV6
LinkDB
All DBs
Position
complement(2682615..2684420)
Genome browser
AA seq
601 aa
AA seq
DB search
MLTPQFILNLSAKLVIVLFAGSGGSCTGIEQAIGRHVDIAVNHNENAVSCHRINHPQTRH
YRKDVRELCPRELTGGQSTGYFHASPDCTHFSQALGGQPRDTEIRSLSWIVVRWAGQALP
DVITLENVEQIRKWGPLIAKRDKATGRVIKLDGTVAAPGEYVPRRLQHLVPDPKRIGKTW
ERFLALLRTKGYVIEHRLLRAADYGVPTTRLRLFMVARRDGLPIQWPEATHAQKPAKGLK
KWRSAAECIDFSLPTQSIFDRKKPLVDATCRRIAHGLKRYVLDNADPFIVPVTHSGSVRV
HDIREPLRTVTTAQRGEFMLATPVMIQAGHGEGKPGARRWSYGAKDIRDPVGTITASGGG
QAMAIGTLVQTGYGERAGQAPRALDISKPLGTVVAGAAKHALVTAFVEQANGGHNTTPAR
SANDPLSTVTTAGSQQRLVTAHLAHLRGNCDARPLDEPLRTVSAGGQHHGLVEYHLAPEA
EAGALRCAAFLIRYYGEGGQWGDVRDPMHTITTKDRLALVTVWLQGEPWVIVDICLRMLV
PRELANATGFPRQYVIDRGHDGRMFTKTQQVAMIGNAVPPGLQRAVTAANYREAWQERVA
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccccgcagttcattctcaatctgtcggcgaagctggtcatcgtgctgttcgcc
ggctcgggcggcagttgcaccggcatcgagcaggccatcggccggcacgtcgatatcgcg
gtcaaccacaacgagaacgccgtttcgtgccaccggatcaaccatccgcagacgcggcac
taccgcaaggacgtgcgcgagctgtgcccgcgcgagctgaccggcgggcagtccaccggc
tacttccatgcgagcccggactgcacgcacttcagccaagcgctcggcgggcaaccacgc
gataccgaaatccgctcgctgtcgtggatcgtggtccggtgggccggccaggcgctgccc
gatgtcatcacccttgagaacgtcgagcagatccgcaaatggggcccgctgatcgcgaag
cgcgacaaggccaccggccgcgtcatcaagctcgatggaacggtggccgcaccgggcgag
tacgtgccgcgccgcctgcagcacttggtgccggacccgaaacgtatcggcaagacgtgg
gaacgcttcctcgccctgctgcgcacgaagggctatgtcatcgagcaccgcctgctgcgc
gccgccgactacggcgtgcccaccacgcgcctgcgcctgttcatggtggcgcgccgcgac
ggcctgccgattcaatggccggaagccacgcacgcgcagaagccggcgaagggcctgaag
aagtggcgcagcgcggccgaatgcatcgacttctcgctgcccacgcagagcatcttcgac
cggaagaagccgctcgttgacgcgacgtgccggcgcatcgcccacggcctgaagcggtac
gtgctcgacaacgcagaccccttcatcgtcccggtgacgcactcgggcagcgttcgggtg
cacgacatccgcgaaccgttgcgcaccgtgaccaccgcccagcgcggcgagttcatgctc
gcgacgcccgtcatgatccaagccggccacggcgagggcaagcccggcgccaggcgctgg
agctacggagccaaggacatccgcgaccccgtgggcaccatcaccgccagcggcggcggc
caggccatggccatcggcacgctggtgcaaaccggctacggcgagcgcgccggccaggct
ccgcgcgcgctcgacatctccaagccgctcgggaccgtggtcgccggcgccgcaaagcac
gcgctcgtgacggcgttcgttgaacaggcgaacggcgggcacaacaccacgccggcccgc
agcgcgaacgacccgctttcgaccgtgaccactgccggcagccagcagcggcttgtgacc
gcgcaccttgcacacctgcgcggcaactgcgacgcgcgcccgttggacgaaccgctgcgc
acggtcagcgccggcggccagcaccacggccttgtcgagtaccacctcgcgcccgaagcg
gaggccggcgcactacgctgcgccgctttcctgatccgctactacggcgagggcggccag
tggggcgacgtgcgcgacccgatgcacaccatcaccacgaaagaccgcctcgcgctggtc
acggtgtggctgcagggcgagccgtgggtcatcgtggacatctgcctgcgcatgctggtg
ccgcgcgagcttgcgaacgccacaggctttccgcggcagtacgtcatcgaccgcgggcac
gacggccgcatgttcacgaagacgcagcaggtcgccatgatcggcaacgcggttccgccc
ggactgcagcgcgccgtcacggccgcgaactaccgcgaagcatggcaagaaagagtcgca
gcatga
DBGET
integrated database retrieval system
