Variovorax boronicumulans: CKY39_12465
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Entry
CKY39_12465 CDS
T05068
Name
(GenBank) histidine biosynthesis protein HisIE
KO
K03746
DNA-binding protein H-NS
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vbo03036
]
CKY39_12465
03400 DNA repair and recombination proteins [BR:
vbo03400
]
CKY39_12465
Chromosome and associated proteins [BR:
vbo03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
CKY39_12465
DNA repair and recombination proteins [BR:
vbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CKY39_12465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
Histone_HNS_N
AAA_13
TMF_DNA_bd
V-SNARE
Packaging_FI
DivIC
DosC_2nd
Motif
Other DBs
NCBI-ProteinID:
ATA53943
UniProt:
A0A250DJ04
LinkDB
All DBs
Position
2726039..2726386
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AA seq
115 aa
AA seq
DB search
MASSLADINSQIQKHDEQIAQLRKQAEDLRNQERAGVIEEVRRKIAEYGLTASDLKLGGG
RAAATKRSAGPASAKAAAKYRGPTGETWSGGRGRKPRWVTEALAAGKSLSDYEIK
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcactcgccgatatcaattcccagatccagaagcacgacgagcagattgcg
caattgcgcaagcaggccgaagacctgcgcaaccaggaacgggccggcgtgatcgaagaa
gtgcgcaggaagattgcggaatacggtttgaccgcttccgatctgaagctgggtggtggc
cgtgccgccgcaaccaagcgcagcgcaggtcctgcatccgccaaggccgccgccaaatac
cgcggcccgacgggcgaaacctggtccggtggccgtggccgcaagccgcgctgggtcacg
gaagccctggcagccggcaagtcgctctccgattacgagatcaagtga
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