Variovorax boronicumulans: CKY39_12770
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Entry
CKY39_12770 CDS
T05068
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00061
Fatty acid biosynthesis
vbo00071
Fatty acid degradation
vbo01100
Metabolic pathways
vbo01212
Fatty acid metabolism
vbo02024
Quorum sensing
vbo04146
Peroxisome
Module
vbo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CKY39_12770
00071 Fatty acid degradation
CKY39_12770
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CKY39_12770
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_12770
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vbo01004
]
CKY39_12770
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vbo04147
]
CKY39_12770
Enzymes [BR:
vbo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CKY39_12770
Lipid biosynthesis proteins [BR:
vbo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CKY39_12770
Exosome [BR:
vbo04147
]
Exosomal proteins
Exosomal proteins of breast milk
CKY39_12770
Exosomal proteins of breast cancer cells
CKY39_12770
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Ortholog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
tRNA-synt_His
MraZ
Motif
Other DBs
NCBI-ProteinID:
ATA53999
UniProt:
A0A250DJ65
LinkDB
All DBs
Position
complement(2784078..2785892)
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AA seq
604 aa
AA seq
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MNALPSLTLPQMLREQARLQPQRIAIRQKDFGIWHPLDWAGYLQRASRFGLGLHAMGLAP
GGHLGVISENRVEWLLAQMGAGLIGAVTVGVYPTSPSNEVAYVVGHADIEVIVCEDQEQT
DKVLDALDQLPRLRKIVVIETKGLASYPPEVRERIATFAEVEQAGAAVLARDGTELIDAA
LQRQTLADIGLMIYTSGSTGKPKGAMISYRNIRGVVPGIVDRLGLDGSTTHLSYLPLCHV
AEQMLTAFVPLYLGSQVNFGESIRTVQEDLREVAPTMFLGVPRIWEKLHAGISIKMQETG
RLQRALFRKAIEACAPLAEKPRSAWTLAERGRFALAYWTVLRALQNFIGLRRARIALTGA
APIPADVVRFFRTLGVPLVEVYGLTESTGMVSGHRADAVTIGTVGPPTLGTEHRVGEAGE
LLVRGDMVFEGYYKNPEATASSIRDGWLHTGDVVREEAGGQLRIVDRLKDIMITAGGKNL
TPSEIENTMKGSPFIKECIVVADGRKFVGALLQIDYETVGKWAEAQRLPFTHFRSLVEEP
KVRALIEAEVARGNGKLAQVSQIRRFHLLTKELDHDDGEVTATMKVRRSSIYKAYANEIE
ALYA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgctcccttcgctcacgctgccgcagatgctgcgcgagcaggcacgcctgcag
ccgcagcgcatcgcgatccggcagaaggacttcggcatctggcatccgctggactgggcc
ggctacctgcagcgcgccagccgtttcggcctgggcctgcacgcgatgggcctcgcgccc
ggcgggcacctgggcgtgatctccgagaaccgcgtcgagtggctgctcgcgcagatgggc
gcggggctcatcggcgccgtgaccgtaggcgtgtaccccaccagcccgagcaacgaggtg
gcctacgtggtcggccatgcggacatcgaagtgatcgtctgcgaggaccaggagcagacc
gacaaggtgctcgacgccctcgaccagctgccacgcctgcgcaagatcgtcgtgatcgag
accaagggcctcgcgagctacccgcccgaagtgcgcgagcgcattgcgacctttgcggag
gtcgagcaggccggcgccgcggtgctggcacgcgacggcaccgagcttatcgacgccgcg
ctgcagcgccagacgctggccgacatcggtttgatgatctacacctcgggctccaccggc
aagcccaagggcgcgatgatttcgtaccgcaacatccgcggcgtcgtgcccggcatcgtc
gatcggctcgggctcgacggcagcaccacgcacttgtcgtacctgccgctgtgccacgtg
gccgagcagatgctcacggccttcgtgccgctgtacctgggctcgcaggtcaacttcggc
gaatcgatccgcaccgtgcaggaagacctgcgcgaagtggcgcccaccatgttcctcggc
gtgccgcgcatctgggaaaagctgcacgcgggcatcagcatcaagatgcaggaaaccggg
cggctgcagcgcgcgctgttccgcaaggccatcgaggcctgcgcgccgctggccgagaag
ccgcgcagtgcctggacgctggccgagcgcggccgcttcgccctcgcctactggaccgtg
ctgcgcgcgctgcagaacttcatcggcctgcgccgcgcgcgcatcgcgctcacgggggcg
gcgccgatcccggccgacgtggtgcgtttctttcgcacgctgggcgtgccgctggtcgag
gtgtacgggctcaccgaatcgaccggcatggtctcgggccaccgcgcggacgccgtgacc
atcggcaccgtcggcccacccacgctgggcaccgagcaccgcgtgggcgaagccggcgag
ctgctggtgcgcggcgacatggtcttcgagggctactacaagaaccccgaggccacggcc
tcatcgatccgcgatggctggctgcacacgggcgacgtggtgcgcgaggaagccggtggg
cagctgcgcatcgtcgaccggctgaaggacatcatgatcaccgccggcggcaagaacctc
acgccctcggagatcgagaacaccatgaagggcagccccttcatcaaggaatgcatcgtg
gtggcggacggccgcaagttcgtcggcgcgctgctgcagatcgactacgagacggtcggc
aaatgggccgaggcgcagcgcctgcccttcacgcactttcgctcgctggtggaagaaccc
aaggtgcgcgcgctgatcgaggccgaagtggcgcgcggcaatgggaagctggcgcaggtg
tcgcagatcagacgttttcatctgctcaccaaagagttggaccatgacgacggtgaagtc
accgccaccatgaaggtgcggcgctccagcatctacaaggcctacgccaacgagatcgag
gcgctgtacgcctag
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