Variovorax boronicumulans: CKY39_12780
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Entry
CKY39_12780 CDS
T05068
Name
(GenBank) amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02010
ABC transporters
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKY39_12780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_12780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_12780
Transporters [BR:
vbo02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
CKY39_12780
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ATA54001
UniProt:
A0A250DIN1
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All DBs
Position
complement(2786746..2787891)
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AA seq
381 aa
AA seq
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MLIAAGLAAAVPFAANAQGNEDIVIGGSIPMTGVFAFAGVGINAGIADYVKIVNDAGGIK
GRKLRYVPEDTGYKVDVSVAAFKKITSQNKVNLYYGDSTGFSKTINPELDRGGQILMAGA
SFATELNDPAKYPNQFLVGPDYTEQIGILLRHIAKEKPGAKVAFVYSDSEFGRDPIEASE
AAAKKLGLSVPVKLMTPAGSVDVSTEVIKLRRAAPDYTIFHGYILAPIPEFVQQGKQMGM
TSKWMGTFWTMDSSTVMKMGEGGDGFMGVMPYRYYYDTSAKAPMLDKIRALRPEYQSTAY
TQGFLTAMLFTEAAKRTLDAGKPLDGKNLKAALNTIKDFDTGGIIGTPITIKGNSIPVGR
VYKADMKAQKMVPASDWIALN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
ctgctgatcgccgcgggcctggccgccgccgtgccgttcgcggcgaacgcgcaaggcaac
gaggacatcgtcatcggcggctcgattccgatgaccggtgtgttcgccttcgcgggcgtg
ggcatcaacgccggcattgccgactacgtgaagatcgtgaacgacgcgggcggcatcaag
ggccgcaagctgcgctacgtgcccgaagacacgggctacaaggtcgacgtgtcggtggcg
gccttcaagaagatcacgagccagaacaaggtcaacctctactacggcgactccaccggc
ttctccaagaccatcaaccccgaactggaccgcggcggccagattttgatggcgggcgcc
tcgttcgcgaccgagctgaacgacccggccaagtacccgaaccagttcctcgtgggcccc
gactacaccgagcagatcggcatcctgttgcgccacatcgccaaggaaaagccgggcgcg
aaggtggccttcgtgtactccgactccgagttcggccgcgacccgatcgaggccagcgaa
gccgccgcgaagaagctgggcctgagcgtgcccgtgaagctcatgacgcccgcgggcagc
gtcgacgtgtcgaccgaggtcatcaagctgcgccgcgccgcgcccgactacaccatcttc
cacggctacatcctggcgcccattcccgagttcgtgcagcagggcaagcagatgggcatg
accagcaagtggatgggcaccttctggaccatggacagctccaccgtcatgaagatgggc
gaaggcggcgacggcttcatgggtgtcatgccctaccgctactactacgacacctcggcc
aaggcgccgatgctcgacaagatccgcgcgctgcgccccgagtaccagagcacggcctac
acgcagggcttcctcacggcgatgctgttcaccgaagccgccaagcgcacgctcgacgcc
ggcaagccgctggacggcaagaacctgaaggccgcgctcaacaccatcaaggacttcgac
acgggcgggatcatcggcacgcccatcaccatcaagggcaattcgattcccgtgggccgc
gtctacaaggccgacatgaaggcgcagaagatggtgccggcgtcggactggatcgcactg
aactga
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