Variovorax boronicumulans: CKY39_15000
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Entry
CKY39_15000 CDS
T05068
Name
(GenBank) LysR family transcriptional regulator
KO
K13794
LysR family transcriptional regulator, regulatory protein for tcuABC
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbo03000
]
CKY39_15000
Transcription factors [BR:
vbo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CKY39_15000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ATA54381
UniProt:
A0A250DJS5
LinkDB
All DBs
Position
complement(3274437..3275363)
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AA seq
308 aa
AA seq
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MELRQLRYFVKVCELRSMGRAAVELGVVTSALSQQISRLESELSTRLLRRHSTGVMPTDA
GLAFLHQAQLTLRHADDAVRAAQQARLSGHVSVGLAPTTATVLGVPLMQAMQARYPEVRL
HMVEALSGHLTTMLHARQLDLAVLFQTDTPRRWSVSPLLAEKLFVIASPALTPRPTGKKV
RLSQLAEVPLILPSGSHGLRATLMAAFARARVAPRIVAEVDGLALLMDAVRAGHGATIQP
GAATARHDRDDLSLTQIADAHVGRRNLLVSLSDDELSPAALATRVVVAETARTLVSEGRW
AGASLLES
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaactgagacaactgcgctacttcgtcaaggtctgcgagctgcgcagcatgggccgc
gcggcggtggagctgggggtggtcacctcggcgctgagccagcagatcagccggctcgaa
agcgaactctcgacccggctgctgcgccgccattcgaccggcgtcatgcccaccgacgcc
ggcctggccttcctgcaccaggcccaactcaccttgcgccacgccgacgacgccgtgcgc
gcggcgcagcaggcgcggctgtcgggccatgtgagcgtgggcctggcgcccaccaccgcc
accgtgctgggcgtgccgctgatgcaggccatgcaggcgcgctaccccgaggtgcggctg
cacatggtcgaggcgctgtcgggccacctcacgaccatgctgcacgcgcgccagctcgac
ctggccgtgctgttccagaccgacacgccgcggcgctggagcgtgtcgccgctgctggcc
gaaaagctcttcgtgatcgcgtcgcccgcactcacgccgcgccccacgggaaagaaggtg
cgcctgtcgcagctggccgaggtgccgctgatcctgcccagcggcagccacggcctgcgc
gccacgctgatggccgcctttgcgcgggcgcgcgtggcgccgcgcatcgtggccgaggtc
gacggcctggcgctgctgatggacgcggtgcgcgccggccacggcgccaccatccagccc
ggcgccgccaccgcgcggcacgaccgcgacgacctctcgctcacgcagattgccgacgcg
catgtcgggcgccgcaacctgctcgtgagcctgtcggacgacgagctctcgcccgccgcg
ctggccacgcgtgtggtggtggccgaaacggcgcgcacgttggtcagcgaaggccgctgg
gccggtgcaagtcttctcgaaagctga
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