Variovorax boronicumulans: CKY39_15380
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Entry
CKY39_15380 CDS
T05068
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_15380
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_15380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbo03000
]
CKY39_15380
Transcription factors [BR:
vbo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CKY39_15380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
MarR_2
TrmB
HTH_24
HTH_CodY
MarR
Crp
Rrf2
HTH_54
RepL
Motif
Other DBs
NCBI-ProteinID:
ATA54444
UniProt:
A0A250DJK7
LinkDB
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Position
complement(3351550..3352260)
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AA seq
236 aa
AA seq
DB search
MYLHPLIASVPPDERAALIRSSALHSYRRNEIVLQADTHTDRIYCVATGLLRAVDRDVTT
DFIRRGDFFLGPSLGENSYQATSTLVAALPSSVYHLPVAAVRRLCALYPEVTMGLLEIAM
KRVAMVRGQLRRISSLSSESLVSRVLHELTQLAPAATGGYDKRITQAVIASYSGLSREVV
NKTMRDMESRGLVRRDDQGVHVPPTFASTDFGSLPPDAHELSDELCAWNGDSPEAP
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtatctccatcccctgatcgccagcgtgccgcccgacgagcgcgccgccttgattcgc
agcagcgcgcttcattcctaccggcgcaacgagatcgtgctgcaggcggacacgcacacc
gaccgcatctactgcgtggccacgggcctgctgcgcgcggtcgaccgggacgtgacgaca
gacttcatccgccggggcgatttcttcctcggcccctcgctgggcgagaacagctaccag
gccacctcgacgctggtggccgccctgccctcgtccgtctaccacctgccggtggccgcg
gtgcgccggctgtgcgcgctgtaccccgaggtgaccatgggcctgctggagatcgcgatg
aagcgcgtcgccatggtgcgcgggcagttgcgccgcatctcgtcgctgtcgtccgaaagc
ctcgtgagccgcgtgctgcacgagctgacgcagctggcgccggccgccacgggcggctac
gacaagcgcatcacgcaggcggtgatcgcgtcgtactcggggctgtcgcgcgaggtcgtc
aacaagaccatgcgcgacatggaaagccgcgggctggtgcgccgcgacgatcagggcgtg
cacgtgccgccgaccttcgcctcgaccgatttcggcagcctgccgccggacgcccacgag
ctctccgacgagctctgtgcctggaacggcgacagccccgaagcgccatga
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