Variovorax boronicumulans: CKY39_15850
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Entry
CKY39_15850 CDS
T05068
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00860
Porphyrin metabolism
vbo01100
Metabolic pathways
vbo01240
Biosynthesis of cofactors
Module
vbo_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CKY39_15850 (cobD)
Enzymes [BR:
vbo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
CKY39_15850 (cobD)
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Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
SAT
COQ9
Motif
Other DBs
NCBI-ProteinID:
ATA54518
UniProt:
A0A250DJH1
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All DBs
Position
3448870..3449850
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AA seq
326 aa
AA seq
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MPALDPFTVFALALVAALWLALAVDRWLGEPPTALHPVVWMGRYLDWIGSRLAPRAADAK
PRDLPGFAMGALGWCVGAMAAFAVASAVQSLVMQWLPAWAMAVVLGLAFKPLFAWRMLRD
EVQAVEAALGESLEAGRARLARLVSRDVSVLSEREVRESAIESLAENLNDSLVAPVFWFV
LFGLPGAALYRFANTADAMWGYRGERGGRDWTWFGKWAARADDVLSWLPARLTVLLLALA
AGRWPRGVAREARRTPSPNSGWPMGAMALLLGVRLAKPGVYALNGEGRAATSADTARTAQ
LGERAAWGLAVIASLAMLSPLLARWA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgctcgatcccttcaccgtcttcgccctcgcgctggtcgccgccttgtggctg
gcactggccgtcgaccgctggctgggcgagccgcccaccgcgctgcatccggtcgtgtgg
atgggccgctacctggactggatcggcagccgcctcgcaccgcgcgccgccgacgcgaag
ccgcgcgacctgccgggcttcgcgatgggcgcgctcggctggtgcgtgggcgcgatggcg
gcgttcgccgtcgcgtcggcagtgcagagcctggtgatgcaatggctgccggcctgggcc
atggccgtggtgctcgggctcgcgttcaagccgctctttgcatggcgcatgctgcgcgac
gaggtgcaggcggtcgaagccgcgctgggcgaatcgctcgaggcgggccgtgcacggctc
gcgcgcctcgtgagccgcgatgtctcggtgctgagcgagcgcgaggtgcgcgagagcgcc
atcgagtcgctggccgagaacctcaacgactcgctggtggcgcccgtgttctggttcgtg
ctgttcggcctgccgggcgcggcgctctaccgcttcgccaacaccgccgatgccatgtgg
ggctatcgcggtgaacgcggcgggcgcgactggacctggttcggcaagtgggccgcgcgc
gcggacgacgtgctctcgtggctgcccgcgcgcctcaccgtgctgctgctggccctcgcg
gccggccgctggccgcgcggcgtggcccgcgaggcgcgccgcacgccgtcacccaacagc
ggctggccgatgggggcgatggcgctgctgctgggtgtgcggcttgcgaagccgggtgtg
tatgcgctgaacggggaagggcgcgccgccacgtcggccgacaccgcgcgcaccgcgcaa
ctcggcgaacgggcggcgtgggggctggcggtgatcgcctcgctggcgatgctgtcgccg
ttgctggcgaggtgggcatga
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