Variovorax boronicumulans: CKY39_16315
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Entry
CKY39_16315 CDS
T05068
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbo03009
]
CKY39_16315
Enzymes [BR:
vbo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CKY39_16315
Ribosome biogenesis [BR:
vbo03009
]
Prokaryotic type
ribosomal protein modification factors
CKY39_16315
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
ATA54600
UniProt:
A0A250DJS7
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All DBs
Position
3531014..3532411
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AA seq
465 aa
AA seq
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MTTTETAERPKIPSIGMVSLGCPKALTDSELILTQLSAEGYQTAKTFEGADLVIVNTCGF
IDDAVKESLDTIGEALAENGRVIVTGCLGAKTGDQGGNLVRQMHPSVLAVTGPHATQEVM
DAVHANLPKPHDPFIDLVPNTFGVAGLKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLV
SRPVGDVLSEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVRTLG
EIAEPYGAWVRLHYVYPYPSVDEIIPLMASGLVLPYLDVPLQHSHPDVLKRMKRPASGEK
NLERIARWREVCPELVIRSTFIAGFPGETEQEFEHLLDFIREAEIDRAGCFAYSPVEGAT
ANDIPGMLPEAEREARRARFMEVAEAVSIAKLQKRIGSTMQVLVDSAPALGRKGGVGRTY
ADAPEIDGTVRLLPPEKISKTMKVGEFTRARIVGAEGHDLIALPV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaccgagaccgctgagcgcccgaaaatcccgagtataggaatggtatcgctc
ggctgccccaaggccttgaccgattccgaattgatcctgacccagctgagtgccgagggg
tatcaaaccgccaagactttcgagggcgccgacctcgtcatcgtcaacacctgcggcttc
atcgacgatgccgtgaaggaaagcctggacaccatcggcgaagcgctcgccgagaacggc
cgtgtgatcgtcaccggctgcctgggcgccaagaccggcgaccaggggggtaacctcgtg
cgccagatgcaccccagcgtgctggccgtcaccggtccgcatgccacgcaggaggtgatg
gatgccgtgcacgccaacctgccgaagccgcacgatccgttcatcgatctcgtgccgaac
accttcggggtggccggtctcaagctgacgccgcggcactacgcctacctgaagatcagc
gaaggctgcaaccaccgctgcaccttctgcatcattccctcgatgcgcggcgacctcgtc
tcgcgtccggtgggcgatgtgctcagcgaagccaaggctctgttcgagggcggcgtgaaa
gaactgctagtgatcagccaggacacctcggcctacggcgtcgacgtgaagtaccgcacc
ggcttctgggacggcaagcccgtcaagacccgcatgctcgaactcgtgcgcacgctgggc
gaaattgccgagccgtatggcgcctgggtgcgcctgcactacgtgtacccgtatccgagc
gtcgacgaaatcattccgttgatggcgagcggcttggtgctgccgtacctcgacgtgccg
ctgcagcacagccaccccgacgtactcaagcgcatgaagcggccggccagcggcgagaag
aacctggagcggatcgcgcgttggcgcgaggtctgccccgaactcgtgatccgcagcacc
ttcatcgccggcttcccgggcgagacggagcaggagttcgagcacctgctcgacttcatc
cgcgaggccgaaatcgatcgtgccggctgctttgcctacagtccggtcgaaggcgccacc
gccaacgatatcccgggcatgctgcccgaagccgagcgcgaagcgcgccgcgcccgcttc
atggaagtggccgaggccgtgtcgatcgccaagctgcaaaagcgcatcggctcgacgatg
caggtgctggtcgattcggcgccggcactgggtcgcaagggtggagtggggcgtacgtac
gccgatgccccggagatcgacggcaccgttcgcctcctgccgcccgaaaagatcagcaag
acgatgaaggtcggcgagttcacgcgtgcacgcatcgtgggcgctgaaggccacgacctg
atcgcgttgcccgtttga
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