Variovorax boronicumulans: CKY39_16510
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Entry
CKY39_16510 CDS
T05068
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_16510
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_16510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbo03000
]
CKY39_16510
Transcription factors [BR:
vbo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CKY39_16510
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GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
HTH_24
GntR
HTH_11
TrmB
Motif
Other DBs
NCBI-ProteinID:
ATA54627
UniProt:
A0A1E7U179
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All DBs
Position
complement(3571948..3572667)
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AA seq
239 aa
AA seq
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MDDPILTIEEREAINSGRWFSSLSPSLRHDILRCAFVKRYKDGDLLAARGDPPEHWIACA
KGALRVSSTAVSGKQVTLTYVEPGIWFGDVAMFDGERRTHDTYSHGDTTVLCVARADFQK
ILATHVELYEALMRLQARRIRTLFGLVEDLNTLPLRARLAKQLIHLVRSYGVPNLDDGSQ
TRIGLQLAQEELAQLLGASRQRVNQELKTMEREGTIRIEPAGLVVLDRSALMHISEADN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccccattcttaccatcgaagaacgtgaagcgatcaacagtggtcgctggttt
tcttccctatctccatcgctacggcacgacatcctccgatgcgcctttgtcaaacgctac
aaggacggcgacctgctcgccgcgcgcggcgacccgcccgagcactggatcgcctgtgcc
aagggagcgttgcgcgtgagctcgaccgcggtgtcgggcaagcaggtgacgctgacctac
gtcgagccgggcatctggttcggcgacgtggcgatgttcgacggggaacggcgcacgcac
gacacgtactcgcacggcgacaccaccgtgctgtgcgtggcgcgggccgacttccagaag
atcctggccacgcacgtcgagctgtacgaagcgctgatgcggctgcaggcgcgccgcatc
cgcacgctgttcgggctggtggaagacctcaacaccctgcccttgcgcgcacgcctggcc
aagcagctcatccacctggtgcgcagctacggcgtgcccaacctggacgacggcagccag
acgcgcatcggcctgcaactggcgcaggaagaactcgcgcaactgctcggcgcctcgcgc
cagcgggtcaaccaggaactcaagacgatggagcgcgagggcaccatccggatcgagccg
gccggactggtcgtgctggaccgctcggcgctgatgcacatctctgaagcagacaactaa
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