KEGG   Variovorax boronicumulans: CKY39_16620
Entry
CKY39_16620       CDS       T05068                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
vbo  Variovorax boronicumulans
Pathway
vbo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKY39_16620 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vbo02044]
    CKY39_16620 (icmF)
Secretion system [BR:vbo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CKY39_16620 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C DUF4381
Other DBs
NCBI-ProteinID: ATA54646
UniProt: A0A250DJU9
LinkDB
Position
3593387..3597454
AA seq 1355 aa
MQYLKQFLAFLFSRQMLAFLAMVLLALAIWFIGPLLAVDGLRPFASVGVRVTFIVMLLVL
GLLWMVSGPYSLLGVAALCLLVWHAGPLLAIGAAKPLAPLWVRTMVICAILVMYAVYWLY
RLWQALRNNDDLLAKFLRFGQDADKDDSAKEELKTVTATVTRALTQLKGLRGRGGLRRIL
EGKRYLYELPWYMIVGSPGAGKTTALLNAGLQFPLARQMGHASRSMVLRSEGGTLNSDWW
FSNEAVLIDTAGRYTTQESNPVSDPIEWRGFLELLRKHRTRAPLNGVIVALNAAELLTMS
EMERAEHASMVRDRLADLRQELGIRFPVYVIVTKIDLLRGFSEYFQSLTSEGRTQTWGFT
LPFHGIQSSRAAVRDREPLRAQIEAELALLKDRLAAGLRARLNEEFDVDRRKRLFALPQE
LAGMSALLVPMLDEMFLASRFDGTQLHDTLRGVYFTSGAQADLEMPADAGTLFQRLQRSL
GLGAGGASAAGNEEGVKPPGRMASPMRGQQGFFLQDLLTKVIIPEAHLVRPNLRWEFRFR
LLRLTGHALAVVIFLWLAGALALSFGNNRQYLSAVGQRAEALTVQVRQLFADFKPAGVPD
VLSGARELPGYSGLDIDNPPGSFLYGLYTVPPVLDAASDTYAQLQDHTLLPSVLQRMESV
LKQSMNDGDAKTAYEVLRVYKLLHDKERYMQGGAQDVRNWVLKDWERADSAAAFGGRASM
VGHVTALFSGARPVQSASLPNEALVRAVQNFLDSNTSSQRVYERAKAAMLSEAPQEFTLV
RAVGPQAGTVFSRAGGLPLEKGVTGLFTYDGYHEVFNKRLPEFVVRALDDDAWVMGRGAQ
GGATLATQVKTPALLDEAARKLRNDPLLDDIRRQYLAEYAQHWESFLESIRTVSGSDTTG
TSLGFDLSVLRQLAAPDSPLARLARAAARETTLSRPLVVRTQEEKGFLDKATDELNKQTN
AIGRNLGIRAEERLEKQIVDNRFAALREVVTGQADIGVTSAGAAAGKPGLENISGLLNEF
YTLLVVADTALTAGSLPPGGAEVGARLKLEAGKLPAPFREVLTALAASGGDKVMLGSTGI
LRSQAQLQLDRIMGLMAMQVSEPCKRGVEGRYPLAAVTQDASIEDFSLVFAAGGAADEFF
NKHLAPYVDMSVRPWRYKDPNVANAMVGIDAAAGNGAGLKPATSGPTLLGELLKLLAQSG
PSLDAFYRAQQIRDLFFRDAGGKKLAWKIDLRVLELEPSITELVIDIDGQGQRYVHGPVQ
AFAVNWPGPRGGAMAEITANPRISNPTSTFLAHGPWALFRLLEKGRIVSTATPGRLSVEY
AFDGRRALIDVSSGSQPNPLGSDVLKGFRCPGRAA
NT seq 4068 nt   +upstreamnt  +downstreamnt
atgcaatatctcaaacagttcctggccttcctgttttcccgacagatgctggccttcctc
gcgatggtgctgctggccctcgcgatctggttcatcggcccgctgctcgcagtggatggg
cttcgcccctttgcctcggtcggggtgcgcgtgaccttcatcgtcatgctgctcgtgctc
ggccttctctggatggtgtcgggcccctacagcctgttgggcgtggctgcgctctgcctg
ctcgtatggcatgcagggcctctgctggccatcggggcggcgaagccattggcgccgctc
tgggtgcgcaccatggtcatctgcgccatccttgtgatgtacgcggtgtactggctctac
cgtctctggcaggccttgcgcaacaacgacgatctgctcgcaaagttccttcgctttggc
caggatgccgacaaagacgacagcgcgaaagaggagctcaagacagtcaccgccacggtc
acccgcgccctgacccagctgaagggcttgcgtgggcgcggcgggcttcgccggatcctg
gagggcaagcgctacctctacgaactgccgtggtacatgatcgtcggcagtccgggcgcg
ggcaagacgacggcgctcctgaacgccggactgcagtttcctttggcgcgccagatgggg
cacgcgtccagaagcatggtgctcaggtcggaaggcggcacgctgaacagcgactggtgg
ttctcgaacgaggccgtgttgatcgacacggcaggccgctacaccacgcaggaaagcaat
ccggtctcggaccccatcgagtggaggggattcctggagctgttgcgcaagcaccgcacg
cgcgcgccgctcaacggcgtcatcgtcgcgctcaatgcggccgagctgctcacgatgtcc
gagatggaacgcgcagagcatgcaagcatggtgcgagaccggttggctgatctgcgtcag
gagcttggcatccgcttcccggtctatgtgatcgtgacgaagatcgatctgctgcggggc
ttcagcgagtacttccaatcgctcaccagtgaaggccgcacccagacctggggcttcacg
ctgccgttccacggcatccagagctcgcgcgcggcggtgcgcgaccgcgagccgctgcgc
gcccagatcgaggcggagctggcgttgctcaaggaccgcctggcggcgggtttgcgcgcc
cgattgaacgaggaattcgacgtcgaccgccggaagcgcctgttcgcgttgccccaggaa
ctggccggcatgtcggcgctcctggtgccgatgctcgacgagatgttcctggcgtcgcgt
ttcgacggaacccagctgcacgacacgctgcgtggtgtctatttcacgagtggcgcccag
gccgacctggaaatgcctgccgatgccggcacgttgtttcagcgtctgcagcgcagtctg
ggcctgggggcgggcggcgcatctgcggccggcaacgaagagggggtcaagccaccggga
agaatggcctcgcccatgcggggacagcaagggttctttctgcaggacctgctgaccaag
gtgatcattcccgaggcgcatctggtgcgccccaatctgcgctgggagttccgcttccgg
ttgttgcgtctcacggggcatgcgctggccgtggtgatcttcctgtggcttgccggcgcg
ctggccttgagtttcggcaacaaccgccagtacctgagcgccgtgggccagcgcgccgaa
gcgctcaccgtgcaggtgcgccagctgttcgccgatttcaagcctgcaggggttccggac
gtgctcagcggggcgcgcgagttgccgggctattcgggcctcgacatcgacaacccgccc
ggcagctttctctacggcctctacacggtgcctccggtgctggatgcggccagcgatacc
tacgcccaactgcaggatcacaccctgcttccctccgtcctgcagcggatggagagcgtg
ctgaagcagagcatgaatgacggcgatgccaagaccgcgtacgaggtcttgcgcgtctac
aagctgctgcacgacaaggagcgctacatgcagggcggggcgcaggatgtacgcaactgg
gtgctgaaagactgggagagggccgacagcgctgccgcctttggcggccgggcatcgatg
gtggggcatgtcacggctctgttctccggtgctcgaccagtgcagtccgcatcgctgccc
aacgaggcgctggtgcgcgcagtgcaaaacttcctggacagcaatacctcgagtcagcgc
gtctatgagcgcgccaaggccgccatgctgtccgaggcgccccaggagttcacgctggtg
cgcgcggtcggcccccaagccgggaccgtgttttcccgcgcaggcggtttgcccctggaa
aaaggggtgacgggcctgttcacctatgacggctaccacgaggtcttcaacaagcgcttg
ccggaattcgtggtgcgggccctcgacgacgatgcatgggtcatgggacgcggtgcacag
ggcggcgcgaccttggccacgcaagtgaaaacaccggcgctgctggacgaagcggcccgc
aagctgcgcaacgatccgctgctcgatgacatccggcgccagtatttggcggagtacgcc
cagcattgggagtcttttctcgagtcgatccgcaccgtgagcggcagcgacaccacggga
acgagccttggcttcgatctgagcgtgctgcggcagcttgccgcccctgattctccgctg
gcccggttggcgcgagcggcggcccgcgagaccaccttgtcgcggccgctggtggttcgc
acgcaggaggaaaaaggcttcctcgacaaggccaccgacgaactgaacaagcagaccaac
gccatcggccggaacctcggcatccgggccgaggagcggcttgaaaagcagatcgtcgac
aaccgcttcgccgcactgcgcgaggtcgtcacggggcaggcggacattggcgtgaccagc
gccggtgccgccgcgggcaagccggggctcgaaaacatctctggcctgctgaacgagttc
tacaccttgctggtcgtggcagacacggcgctcacagccggaagcctgcctcccggaggt
gccgaggtcggcgcccgtttgaagctggaggccggcaaattgccggcaccctttcgtgag
gtgctgacggcgctggccgcaagcggtggcgacaaggtgatgctcggctccacgggcatc
ctgcgcagccaggctcaactgcagctcgaccgcatcatggggttgatggcgatgcaggtc
agcgagccctgcaagcgcggcgtggaagggcgatacccgctggccgccgtgacgcaagat
gcgtccatcgaagacttttcgctggtgttcgctgccggcggtgcggcggatgagttcttc
aacaagcacctcgccccttatgtggacatgagcgtgcggccgtggcgctacaaggatccg
aatgtggccaatgccatggtcggcatcgacgcggcggcaggcaacggcgccgggctgaag
ccggccacttccggcccgaccctgctcggtgaattgctcaaactgctggcccagagtggt
ccgagtctcgatgccttctaccgcgcacagcagattcgcgacctgttcttccgcgacgcg
ggcggcaagaagctggcctggaaaatcgatctgcgtgtgcttgagctcgagcccagcatc
accgaactggtcatcgacatcgacgggcaagggcagcgctacgttcatggcccggtgcag
gcctttgccgtgaactggccagggccccgcggcggggcgatggcggagatcacggccaat
ccccgcatttcgaacccgacctcgaccttcctggcccatgggccgtgggccttgtttcgt
cttctggagaaagggcgcatcgtgagcacggccacgccggggcgattgagcgtggaatat
gcgttcgacggccgcagggcgttgatcgatgtcagttcgggcagtcagccgaatcccctc
ggtagcgatgtgctcaagggctttcgttgccctggacgcgcagcctga

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