Variovorax boronicumulans: CKY39_16720
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Entry
CKY39_16720 CDS
T05068
Name
(GenBank) tRNA adenosine(34) deaminase TadA
KO
K01563
haloalkane dehalogenase [EC:
3.8.1.5
]
K11991
tRNA(adenine34) deaminase [EC:
3.5.4.33
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00361
Chlorocyclohexane and chlorobenzene degradation
vbo00625
Chloroalkane and chloroalkene degradation
vbo01100
Metabolic pathways
vbo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
CKY39_16720
00361 Chlorocyclohexane and chlorobenzene degradation
CKY39_16720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vbo03016
]
CKY39_16720
Enzymes [BR:
vbo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.33 tRNA(adenine34) deaminase
CKY39_16720
3.8 Acting on halide bonds
3.8.1 In carbon-halide compounds
3.8.1.5 haloalkane dehalogenase
CKY39_16720
Transfer RNA biogenesis [BR:
vbo03016
]
Prokaryotic type
tRNA modification factors
Deaminases
CKY39_16720
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Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
Abhydrolase_1
HUTI_composite_bact
RMMBL
XPG_N
Motif
Other DBs
NCBI-ProteinID:
ATA54664
UniProt:
A0A250DK74
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All DBs
Position
3614987..3616102
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AA seq
371 aa
AA seq
DB search
MTTEPAASTSDAHWMALALQEAQRAADAGEVPVGAVLVQDGQIIATGRNTPVAQHDPSAH
AEINALRAGAAALGNYRLDGCELFVTLEPCAMCAGAMLHSRLARVVFGAADPKTGAAGSV
LDLFAEPKLNHHTRVQGGVLADDCSALLQRFFQQRRSAARAQAEPLRDDALRTPVERFAA
LTDFGFAPHHVQDLPILQGWRLHWIDESGPAGSDGRVADVLCLHGPGEWGYFFRHLVRTP
GLRTLVPDLIGFGKSDKPKREATHQLEWHRDVLLAWLDQVHPEPLALVHSEGGDELATLL
QTAAPGRFSATLTAPDSGVRAKDAWRAPFPDRGYEAALRALGPRPASGGPTVAQATPLAR
QIRDAMGYSTT
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgagccggccgcatcgacatcggacgcgcactggatggcgctcgcgctgcag
gaagcgcaacgcgcggccgacgcgggcgaggtgcccgtgggcgcggtgctggtgcaggac
ggccagatcatcgcaaccggccgcaacacgcccgtggcgcagcacgacccgagcgcgcac
gccgagatcaatgcactgcgcgccggcgccgccgcgctcggcaactaccggctcgacggc
tgcgagctgttcgtcacgctcgaaccctgcgccatgtgcgcgggcgcgatgctgcattcg
cggctggcgcgcgtggtgttcggcgccgccgaccccaagaccggtgccgcgggctcggtg
ctcgatctcttcgccgagccgaagctgaaccaccacacgcgcgtgcaaggcggcgtgctg
gccgacgactgcagtgcgctgctgcagcgcttcttccagcaacgccgcagcgccgcgcgc
gcgcaggccgagccgctgcgcgacgatgccttgcgcacgcccgtcgaacgctttgccgcg
ctcaccgatttcggcttcgcgccgcatcacgtccaggacctgccaatcttgcaaggctgg
cgcctgcactggatcgacgaatccggcccggccggcagcgacggccgcgtggcggacgtc
ctgtgcctgcatggcccgggcgagtggggctacttcttccgccacctggtccgcacgccc
ggcctgcgcacgctggtgcccgacctgatcggtttcggcaagagcgacaagcccaagcgc
gaggcgacgcaccagctcgaatggcaccgcgacgtgctgctggcgtggctcgaccaggtg
catcccgaaccgctcgcgctggtgcacagcgaggggggcgatgaactggcaacgctgctg
caaacggcggcgccgggccgcttcagcgcgacgctaaccgcacccgacagcggcgtgcgc
gccaaggacgcctggcgcgcgccgttccccgaccggggctacgaggccgcgctgcgcgcg
ctcggtccacgcccggcatcgggcggtccaacggtggcgcaggccacccccctggcccgg
cagatccgggacgcaatgggatactcgacgacgtga
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