Variovorax boronicumulans: CKY39_17165
Help
Entry
CKY39_17165 CDS
T05068
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CKY39_17165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
DUF460
HHH_6
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ATA54741
UniProt:
A0A250DKS5
LinkDB
All DBs
Position
complement(3710003..3712378)
Genome browser
AA seq
791 aa
AA seq
DB search
MQKIIRQLAVEIKVGEHQVKAAVELLDEGATVPFIARYRKEVTGGLDDIQLRELEARLSY
LRELEDRRVAVLKAIDEQGKLTPELRAAIEFAPTKQELEDLYLPFKQKRRTKGQIAREFG
IEPLADKLLADPTLDPAVEAKAFLQPATTLDDGKPGPDFSTVPLVLDGVRDILSERWAED
AVLVQRLREWLWNEGLLKSSLMAGKDENNADIAKFRDYFDYDEPIGRVPSHRALAVFRGR
ALEVLDAKLVLPVEPEPGKPSIAEGKIALHLGWSHAARPADDLLRKCVAWTWRVKLALST
ERDLFTRLREDAEKVAIKVFADNLRDLLLAAPAGRRVVMGLDPGIRTGVKVAVVDSTGKL
VETATVFPHEPRKDWEGSLHTLGKLCAKHGVNLIAIGNGTASRETDKLAGDLIKLLAKMA
AQAGAPEMTVDKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELVKI
DPKSIGVGQYQHDVNQSELARTLQAVVEDCVNSVGVDLNTASVPLLSRVSGLSASVAKAV
VRWREANGAFSTRKQLLDVTGFGPKAFEQSAGFLRIRDGADPLDITGVHPETYPLVEQII
VKTGKPIAELMGRADMLKTLKPELFANEKFGVITVKDILGELEKPGRDPRPDFKVARFND
GVDDISDLTEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDI
VKVKVMEVDVARKRIGLSMKLDAAPARRDGPRDNRFEGAGRGQQQQGRRDNSPQPAGQMA
SAFAKLQGLRK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcattcgccagctcgccgttgaaatcaaggtcggcgagcaccaggtgaag
gccgccgtcgaactgctcgacgaaggcgccacggttccgttcattgcccgctatcgcaag
gaagtcacgggcggcctcgacgacatccagctgcgcgaactggaagcccggctgtcttac
ctgcgcgaactcgaagaccgccgcgtggcggtgctcaaggccatcgacgagcagggcaag
ctgacccccgagctgcgcgccgcgatcgaattcgcgcccaccaagcaggagctcgaagac
ctgtacctgccgttcaagcagaagcgccgcaccaagggccagatcgcccgcgaattcggc
atcgagccgctggccgacaagctcctggccgaccccacgctcgacccggccgtcgaggcc
aaggccttcctgcagcccgccaccacgctggacgacggcaagccgggccccgatttctcc
accgtgcccctcgtgctcgacggcgtgcgcgacatcctgtccgagcgctgggccgaagac
gccgtgctggtgcagcgcctgcgcgaatggctctggaacgaaggcctgctcaagtccagc
ctgatggccggcaaggacgagaacaacgccgacatcgccaagttccgcgactacttcgac
tacgacgaacccatcggccgcgtgccttcgcaccgcgccctggccgtgttccgcggccgc
gcgctcgaggtgctcgacgccaagctcgtgctgcccgtcgaacctgagccgggcaagccc
agcatcgccgaaggcaagatcgcgctgcacctgggctggagccacgccgcccgcccggcc
gacgacctgctgcgcaagtgcgtggcctggacctggcgcgtgaagctggcgctgtcgacc
gagcgcgacctgttcacccgcctgcgcgaagacgccgaaaaggtcgccatcaaggtgttc
gccgacaacctgcgcgacctgctgctggcggcccccgctggccgccgcgtcgtgatgggc
ctggacccgggcatccgtaccggcgtgaaggtggccgtggtcgattccaccggcaagctg
gtcgagaccgccaccgtgttcccgcacgagccgcgcaaggactgggaaggctcgctgcac
acgctgggcaagctgtgcgccaagcacggcgtgaacctcatcgccatcggcaacggcacc
gccagccgcgagaccgacaagctggccggcgacctcatcaagctgctggccaagatggcc
gcgcaggccggtgcgcccgaaatgacggtcgacaaggtcgtggtcagcgaagccggcgcc
tccgtgtattccgccagcgaattcgcctcgcaggaaatgcccgacgtcgacgtgagcctg
cgcggcgccgcctccattgcgcgccgcctgcaggacccgctggccgagctcgtgaagatc
gaccccaagagcatcggcgtgggccagtaccagcacgacgtgaaccagagcgaactcgcg
cgcaccctgcaggccgtggtcgaagactgcgtgaactcggtgggcgtcgacctgaacacc
gccagcgtgccgctgctcagccgcgtgtccggcctgtcggccagcgtggccaaggccgtg
gtgcgctggcgcgaggccaacggtgcgttctcgacccgcaagcagctgctcgacgtgacc
ggcttcggccccaaggccttcgagcagagcgccggcttcctgcgcatccgcgacggcgcc
gacccgctggacatcaccggcgtgcaccccgaaacgtacccgctggtcgagcagatcatc
gtcaagaccggcaagcccatcgccgagctgatgggccgcgccgacatgctcaagaccctc
aagcccgagctgttcgccaacgagaagttcggcgtcatcacggtcaaggacatcctgggc
gaactcgagaagcccgggcgcgacccgcgtcccgacttcaaggtggcgcgcttcaacgac
ggcgtggacgacatctccgacctcaccgagggcatgatcctcgagggcaccgtgagcaac
gtcgcccagttcggcgcctttgtcgacctcggtgtgcaccaggacggcctggtccacgtg
agccagctgagccacaagttcgtcaacgatgcccgcgaagtcgtcaagaccggcgacatc
gtcaaggtcaaggtgatggaagtcgacgtggcccgcaagcgcatcggcctgtcgatgaag
ctcgacgccgcccccgcacgccgcgacggcccgcgcgacaaccgcttcgaaggggcagga
cgcggccagcaacaacaaggccggcgcgacaactcgccgcagccggcggggcagatggcg
agtgcgtttgccaagctgcaagggttgcgcaagtaa
DBGET
integrated database retrieval system
