Variovorax boronicumulans: CKY39_18260
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Entry
CKY39_18260 CDS
T05068
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00300
Lysine biosynthesis
vbo01100
Metabolic pathways
vbo01120
Microbial metabolism in diverse environments
vbo01230
Biosynthesis of amino acids
Module
vbo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CKY39_18260
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vbo01002
]
CKY39_18260
Enzymes [BR:
vbo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CKY39_18260
Peptidases and inhibitors [BR:
vbo01002
]
Metallo peptidases
Family M20
CKY39_18260
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Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ATA54935
UniProt:
A0A250DKP5
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All DBs
Position
3949410..3950597
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AA seq
395 aa
AA seq
DB search
MSRTLQLAEQLISRPSVTPDDAGCQKILGERLAALGFTLETIESGPTDFRVTNLWAVRRP
TNGKPTKTLVFAGHTDVVPTGPLDQWSSHPFTPTHRDGKLYGRGACDMKTSVAAFVTSIE
EFLQGEPDPALTLALLLTSDEEGPGVDGTVIVCNALAARGETIDYCIVGEPTSVARCGDM
IKNGRRGTMSGKLTVNGVQGHIAYPHLAKNPVHAVAPALAELVAINAAGGWDAQSNPYFQ
PTSWQISNFHAGTGASNVIPGSAVIDFNFRFSTESTPESLQQRVHAVLDAHGVDYTLTWT
VGGLPFLTTPGELVTAVQAAIREETGLDTELSTSGGTSDARFIAKICKQVVECGPVNASI
HKIDEHIEVAEIETLKNIYLRTLRGLDAALAQGAR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtacgctccagctcgccgaacaactgatctcgcgcccttccgtcacccccgac
gacgcgggttgccaaaagatcctgggcgaacgcctcgccgcgctgggcttcacgctggaa
accatcgagagcggcccgaccgatttccgggtcaccaacctctgggccgtgcgccggccc
acgaacggcaagccgacgaagacgctggtgtttgctggccacaccgacgtggtgcccacc
ggcccgctcgaccagtggagcagccacccgttcacgcccacgcaccgcgacggcaagctc
tacggccgcggcgcctgcgacatgaagacctcggtcgcggccttcgtgacctccatcgaa
gaattcctgcagggcgagcccgacccggcgctcacgctggcgctgctgctgaccagcgac
gaggaaggcccgggcgtcgacggcaccgtgatcgtctgcaacgcgctggccgcacgcggt
gaaaccatcgactactgcatcgtcggcgagcccacctcggtcgcacgctgcggcgacatg
atcaagaacggccgccgcggcaccatgagcggcaagctcacggtgaacggcgtgcagggc
cacatcgcctacccgcacctggcgaagaacccggtgcatgcggtggcgccggcactggcc
gaactggtggcgatcaacgccgccggcggctgggacgcgcaaagcaacccctacttccag
ccgaccagctggcagatcagcaacttccacgcgggcaccggcgcgagcaacgtgattccg
ggcagcgcggtgatcgacttcaatttccgcttctcgaccgaatcgacgcccgaatcgctg
cagcaacgcgtgcacgccgtactcgacgcacacggcgttgactacacgctgacctggacc
gtcggcggcctgcccttcctgaccacgccgggcgaactcgtcacggcggtgcaggcggcg
atccgcgaagaaaccggtctggacaccgagctgtcgaccagtggcggcaccagcgacgcg
cgcttcattgccaagatctgcaagcaggtggtcgagtgcggcccggtgaacgccagcatc
cacaagatcgacgagcacatcgaggtggccgagatcgagacgctgaagaacatctacctg
cgcacgctgcgcgggctcgacgcggcgcttgcgcaaggcgcgcgatga
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