Variovorax boronicumulans: CKY39_20040
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Entry
CKY39_20040 CDS
T05068
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbo03009
]
CKY39_20040
Ribosome biogenesis [BR:
vbo03009
]
Prokaryotic type
GTPases
CKY39_20040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
AIG1
Dynamin_N
RsgA_GTPase
Roc
AAA_22
ABC_tran
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ATA55247
UniProt:
A0A250DLK4
LinkDB
All DBs
Position
complement(4305629..4306972)
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AA seq
447 aa
AA seq
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MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADFAGLTRDRHYGNGRLGKHEFIVIDTGGF
EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLGKPCVLAANK
AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVELALEPLNLADPDDEEDEDEVNKP
IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQRFELIDTAGLRR
KGRVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVIAINK
WDAVDSYQREQIQRQIETRLPFLKFASLHFISAIKRQGLGPVWQAIAQAHKSATRKMSTP
VLTRLLLEAVQFQAPQRGGMFRPKLRYAHQGGMNPPVIIIHGNSLEHVTDAYKRFLEGRF
RKEFDLVGTPLRIQFKSSQNPFVDKDN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggtcgtggccctggtcggccgtcccaacgtcggcaagtcgacgctcttcaac
cgcctgacccagacgcgcgacgccatcgtcgccgacttcgctggcctcacgcgcgaccgc
cattacggcaacggtcgcctgggcaagcacgagttcatcgtgatcgacaccggcggcttc
gagcccgacgccggcagcggcatctacaaggaaatggccaagcagacgcgccaggccgtg
gccgaggccgacgtcgtgatcttcgtggtcgatgcccgcgaaggcctctcggcgcaagac
cacgacatcgccaacgagctgcgccgcctgggcaagccctgtgtgctggcggccaacaag
gccgaaggcatgcacgacggcaccaagctggtcgacttctacgagctgggcttcggcgac
gtgcacggcgtttccgcggcgcacgggcagggcatgcgcgacctggtcgagctggcgctt
gaaccgctgaacctggccgacccggacgatgaggaagacgaagacgaggtcaacaagccg
atcaagctggcggtggccggccggcccaacgtcggcaagtccacgctgatcaacacctgg
cttggcgaagagcgcctggtcgccttcgacatgcccggcacgacgcgcgacgccatctcg
gtgccgttcgagcgcaacggtcagcgcttcgagctgatcgacaccgccggtctgcgccgc
aagggcagggtcttcgaggcgatcgagaagttctcggtggtcaagacgctgcaggccatc
gagtcggccaacgtcgtgctgctgctgctcgacgccacgcagggcgtgaccgaccaggac
gcgcacatcgccggctacatccttgaaagcggacgtgccgtggtgatcgccatcaacaaa
tgggacgcggtcgacagctaccagcgcgagcagatccagcggcagatcgaaacccgcctg
ccgttcctcaagttcgcgtcattgcatttcatctcggccatcaagcgccagggcctgggc
ccggtgtggcaggccattgcacaggcccacaagtcggccacgcgcaagatgtcgacgccg
gtgctgacgcgcctgctgctcgaggcggtgcaattccaggcgccccagcgcggtggcatg
ttccggcccaagctgcgctatgcgcaccagggcggcatgaatccgcccgtgatcatcatt
cacggcaattcgctggagcatgtgaccgacgcctacaagcgtttcctggaagggcgtttc
cgcaaggaattcgacctcgtgggcacgcccttgcggatccagttcaaaagctcgcagaat
ccgttcgtggacaaggacaactga
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