Variovorax boronicumulans: CKY39_20345
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Entry
CKY39_20345 CDS
T05068
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00051
Fructose and mannose metabolism
vbo00541
Biosynthesis of various nucleotide sugars
vbo01100
Metabolic pathways
vbo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
CKY39_20345 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CKY39_20345 (gmd)
Enzymes [BR:
vbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
CKY39_20345 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Motif
Other DBs
NCBI-ProteinID:
ATA55305
UniProt:
A0A250DLR4
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Position
4388651..4389688
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AA seq
345 aa
AA seq
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MKKRAVVTGITGQDGAYLAELLLGKGYTVYGTFRRTSSVNFWRIESLGIQDHPELHLVEY
DLTDLGSSITLIRDAQPDEVYNLAAQSYVGASFNQPEATTNINGLGTLHLLDAIRLTDLG
IRYYQASTSEMFGNVQAIPQKEDTPFYPRSPYGVSKLFAHWMTMNYRESYGLFGCCGILF
NHESPLRGREFVTRKVTDAAAKIRLGKLDVLTLGNMDAKRDWGYAKEYVDGMWRMLQADK
PDNYVLATNRTETVRDFVDMAFRAAGYELRFEGTAQEEVAIDRESGNVLVRIDPKFYRPA
EVELLIGDASHARRTLGWEPRTTLEELCAMMVEADLQRNREGRSF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgtgctgtcgtcactggcattaccggacaggacggggcgtacctggccgag
ctgctgctgggcaagggctacaccgtctacggaaccttccgccgaaccagttcggtgaac
ttctggcgcatcgagtcgctcggcatccaggaccatccggagcttcatctcgtggagtac
gacctgacggacctgggcagttcgatcacgctcattcgcgatgcgcagcccgacgaggtc
tacaacctggcggcgcagagctacgtgggcgcgagcttcaaccagcccgaagccaccacg
aacatcaacggtctgggcaccctccacctgctcgacgcgatccgcctgacggacctcggg
atccggtactaccaggcctcgacgtcggagatgttcggcaacgtgcaggccattccgcag
aaggaagacacgcccttctatccccgcagcccgtacggcgtctccaagctcttcgcccac
tggatgacgatgaactaccgcgagagctacgggctcttcggttgctgcggcatcctcttc
aaccacgagagcccgttgcgcggccgcgaattcgtgacacgcaaggtcaccgacgcggcg
gccaagatcaggctcggcaagctcgatgtgctcacgctgggcaacatggacgccaagcgc
gactggggctatgcgaaggaatacgtcgatggcatgtggcgcatgctgcaggccgacaag
ccggacaactacgtgctcgccaccaaccgcacggaaaccgtgcgggatttcgtcgacatg
gcgttcagggccgcgggctacgaactccggttcgaagggacggcgcaggaagaggtcgcc
atcgaccgcgagagcggcaacgtcctcgtgaggatcgatccgaagttctatcggccggcg
gaggtggaactgctcatcggcgatgcgtcgcatgccaggaggacgctgggctgggagccg
cggacgacgctggaggagctgtgcgcgatgatggtggaggccgacttgcagcgcaaccgc
gaaggccgctccttctga
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