KEGG   Variovorax boronicumulans: CKY39_21230
Entry
CKY39_21230       CDS       T05068                                 
Name
(GenBank) DNA oxidative demethylase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
vbo  Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vbo03400]
    CKY39_21230
Enzymes [BR:vbo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     CKY39_21230
DNA repair and recombination proteins [BR:vbo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    CKY39_21230
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy_3
Other DBs
NCBI-ProteinID: ATA55464
UniProt: A0A250DMI5
LinkDB
Position
4579078..4579734
AA seq 218 aa
MTFDLFDAPPRAAREPIGPAAFVLPGFALPRAEALLDAIDGVAARAPFRHLVTPGGFTMS
VALTNCGALGWTSDRRGYRYSAVDPDSGAPWPAMPEAFAQLARDAAALAGFDGFAPDACL
VNRYQPGSRLSLHQDRDERDHGAPIVSVSLGMPAVFQFGGLARADKTTRIPLVHGDVVVW
GGVDRLRFHGVLPLKDAPHPLQARLGAQRINLTFRKAG
NT seq 657 nt   +upstreamnt  +downstreamnt
atgacgttcgacctcttcgacgccccgccgcgcgccgcgcgcgagccgatcggtccggcc
gccttcgtgctgccgggctttgcgctgccgcgcgccgaggcgctgctcgacgccatcgac
ggcgtggcggcgcgcgcgccgttccgccacctggtcacgccgggcggcttcaccatgtcg
gtcgcgctgaccaactgcggcgcgctcggctggaccagcgaccggcgcggctaccgctac
agcgcggtcgaccccgacagcggcgcgccctggcccgcgatgcccgaggcctttgcgcag
ctggcgcgcgacgcggcggcgctggccggcttcgacggctttgcgcccgacgcttgcctg
gtcaaccgctaccagccgggcagccggctctcgctgcaccaggaccgcgacgagcgcgac
catggcgcgccgatcgtgtcggtgtcgctgggcatgccggcggtgttccagttcggcggg
ctcgcgcgcgccgacaagaccacccgcattccgctggtgcacggcgacgtggtggtgtgg
ggcggcgtggaccggctgcgctttcatggcgtgctgccgctcaaggacgcgccgcatccg
ctgcaggcccggctcggcgcgcagcgcatcaacctcaccttccgcaaggccggttga

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