Variovorax boronicumulans: CKY39_23300
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Entry
CKY39_23300 CDS
T05068
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_23300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
Big_11
Big_6
Cadherin
VWA_2
VWA_CoxE
He_PIG
Motif
Other DBs
NCBI-ProteinID:
ATA55831
UniProt:
A0A250DNZ7
LinkDB
All DBs
Position
complement(5048700..5056352)
Genome browser
AA seq
2550 aa
AA seq
DB search
MEAVYKSGGASSRKATAEAPLVLDRPSIVTLKIAPESVLKFERRGDDLVLVLRDGQEVAV
RGFFAEYPDAGRNDLVLEDGAGVQWWGQYTAPWKDFHFTEIEWNDAGGALLPDGVPGWLL
GALGVLGVGAAASGGGGGGGGPAFIPPLLPAQNRGPEGKADPVVTDQDKPVSGQVQATDP
DRDTLTYTVAKGPEHGTVTVDPTTGQFVYTPKPGYEGPDSFEVTVSDGKGGTTTVTVPVT
VSPVNDAPTAPDYTEATNEDTPVSGRVTGSDIDSGDTLTYTKGSDPAHGTVTVNPDGTYT
YTPNPDFHGTDSFTVTVSDGHGGTTTSTVTVTVDPVNDAPTAPAYAETTNEDTPVNGKVT
GTDVDGDPLTYTKGSDPANGTVTVNPDGTYVYTPNPNFNGTDMFTVTVSDGHGGTTTSTV
TVTVDPVNDEPTVPDYTKTTNEDTPVSGQVVGSDVDGDTLTYVKGSDPAHGTVTVNADGT
YTYTPGANFNGTDSFTVTVSDGHGGTKTSTITVTVDPVNDDPAAPNYTKTTSEDTPVSGK
VTGTDVDGDALTYTKGSNPSNGSVTVNSDGTYVYTPNPDFHGTDSFTVTVSDGHGGTTTS
TVTVTVSPVNDAPKAPDYNETTNEDTPVSGSVVGTDVDGDALTYVKGSDPAHGTVTVNPD
GTYVYTPNPNFNGTDSFTVTVSDGHGGTTTSTVTVTVDPVNDAPTVPNYNQTTNEDTPVS
GQVVGSDVDGDTLTYTKGSDPAHGTVTVNADGTYTYTPGANFNGTDSFTVTVSDGHGGTT
TSTVNVTINPFNDAPTVPNYNQTTDEDTPVSGKVVGSDVDGDTLTYTKGSDPAHGTVTVN
ADGTYTYTPGANFNGTDSFTVTVSDGHGGTTTSTVNVTINPVNDAPTVPNYTETTNEDTP
VSGQVTGSDVDGDTLTYVKGSDPANGTVTVNADGTYTYTPNANFNGTDTFTVTVSDGHGG
TTTSTITVTVDPVNDAPTVPNYTETTNEDTPVNGQVVGSDVDGDALTYTKGSDPAHGTVT
VNADGTYTYVPGANFHGTDSFTVTVSDGHGGTTTSTITVTVDPVNDAPTVPNYTETTNED
TPVNGQVVGSDVDGDTLTYTKGSDPAHGTVTVNADGTYTYVPGANFNGTDSFTVTVSDGH
GGTTTSTVNVTVNPVNDAPTVPNYIETTNEDTPVSGQVVGSDVDGDTLTYVKGSDPAHGT
VTVNPDGTYTYVPGANFNGTDSFTVTVSDGHGGTTTSTVNVTVNPVNDAPTAPNYTETTN
EDTPVSGQVVGSDVDGDTLTYVKGSDPAHGTVTVNADGTYTYVPGANFNGTDTFTVTVSD
GHGGTTTSTITVTVDPVNDAPTVPNYAQTTDEDTPVSGQVIGSDVDGDALTYALGNGPAH
GSVTVNADGTYTYVPSANFNGTDTFTVTVSDGHGGTTTSTVTVTIDPVNDAPTVPNYTQT
TDEDTPVSGQVVGSDVDGDTLTYVKGSDPTNGTVTVNADGTYTYTPNANFNGTDTFTVTV
SDGHGGTTTSTVTVTIDPVNDAPVFVDGGGTPVDTATGYVFGYDENRPAGTVLGTVHATD
IDSANVTYSILSGNDQGYFAIDPVTGEISLTPAGAAAFVNDYEAGANAHALVIGATDGTA
TTTIPVTLNEQNINDAPTVPDYAKTTDEDTPVSGQVVGSDVDGDALTYVKGSDPAHGTVT
VNADGTYTYVPGANFNGTDSFTVTVSDGHGGTTTSTVNVTINPVNDAPVFVDGGGTPVDS
ATGYVFGYDENRTAGTVLGTVQATDVDSANVTYSILSGNDAGYFAINPATGEISLTPAGA
AAFVNDYEAGANAHALVVGASDGTVTTNIPVTLNEQNVNEAPEAPDDTKTTDEDTPVSGQ
IVGSDVDGDTLTYVKGSNPSNGTVTVNPNGTYTYVPNANFNGTDSFTVTVSDGHGGTTTS
TVTVTVNPVNDPPTATATDAGIVSEGSLPGGIAAVGEPSVQSTGKISIADPDSLAGDLSV
SLSGPAGVTSGGQPVSWSWDAGTHTLTGSVTVDGVTTEVMTVAVGNVTATGAGQFEAGYT
VTLKAPIDHPAGNGEGLSNLHFEAVVSDGQLSGAPVGFNVPVKDDAPVLVNGEQSVDVAP
INTNLMVILDLSGSMEEETPTRLSRAKAAVQNLIDGYDLYGDVRVQLVTFSTTGHAQQAW
MTAADAKALVQDLQASGSTNYDAALASAMSGFSAGGKLQGAQNVSYFLTDGEPTRGDGNP
DQLGNSSSSNAADKGIQAAEEAIWKTFLTTNHINSFALGLGSSLGPTEQAYIDPIAYNGN
TGTNTNGKIVTDTSQLNDMLQGTISVPPTVSNLLTGGLGGSSGFGADGGHVSTLTIDGTI
YAFDSSTGGMTKTGPATSSDYSYNQATHQVTIATDKGGKLVVDFDTGEFSYQVAPKTTAS
QNYDETLSYQVVDRDGDASNVATQTLHVNYTPAAGAAALFSSADSLGLAGVDEVTVSIEQ
QQQPHDAPHFPFGDGPAWGGLQLSDMLQGFGAAESLHALLQAAFPPAFGGTQASPTVLSL
ASSADSLAAYAPPVAPSLDDELHMGLALHH
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgtttacaagtctggtggcgcgtcatcccgcaaagcgacggcggaagcccct
ctggttctggatcgcccgtcgatcgtcacgctgaagatcgcgcccgagagcgtgctcaag
ttcgagcgccgcggcgacgacctcgtgctcgtgctgcgcgatggccaggaagtcgccgtg
cgcggcttctttgccgagtaccccgacgccggccgcaacgacctcgtgctcgaagacggc
gccggcgtgcagtggtggggccagtacaccgcgccctggaaagacttccacttcaccgag
atcgaatggaacgacgccggcggcgccttgctgcccgacggcgtgccgggctggctgctg
ggcgcgctcggcgtgctgggcgttggtgccgccgcgagcggtggcggcggtggcggtggt
ggcccggccttcatcccgccgttgctgcccgcgcagaaccgcggccctgaaggcaaggcc
gaccctgtcgtcaccgaccaggacaagcccgttagcggacaagtgcaggcgaccgacccc
gaccgtgacacgctgacctacaccgtcgccaagggccccgagcacggcaccgtcaccgtc
gatccgaccacgggccagttcgtctacacccccaagcccggctatgaagggcccgacagc
ttcgaagtgaccgtcagcgacggcaagggcggcaccaccaccgtcacggtgcccgtgacc
gtctcgcccgtgaacgacgcgcccaccgcgcccgactacaccgaggcgacgaacgaagac
acgcccgtgagcggccgcgtgaccggcagcgacatcgacagcggcgacacgctgacctac
acgaagggcagcgacccggcgcacggcacggtgacggtcaacccggacggcacgtacacg
tacacgccgaacccggacttccatgggacggacagcttcacagtgacggtgagcgacggc
catggcggtacgacgacgagcacggtgacggtgacggtcgatccggtgaacgatgcgccg
acggcgcctgcgtatgctgagacgacgaacgaagacacgcccgtcaacggcaaggtcacc
ggtaccgacgtcgatggcgatccactgacctacacgaagggcagcgatccggcgaacggc
acggtgacggtcaatcccgatggcacgtatgtctacacgccgaacccgaacttcaacggg
accgatatgttcaccgtgacggtgagcgacggccatggcggcacgacgacgagcaccgtc
acggtcacggtcgatccggtgaacgatgaaccgacggtgcccgactacaccaagaccacg
aacgaagacacgcccgtcagcgggcaagtggttggcagcgacgtcgatggcgacacgctc
acgtacgtgaagggcagcgacccggcacatggcaccgtcacggtcaacgccgatggcacg
tacacctatacccccggtgcgaacttcaatggcaccgacagcttcactgtgacggtcagc
gacggccacggtggaacgaagaccagcaccattacggtgacggtcgatccggtgaacgat
gatccggcggcaccgaactacaccaagaccacgagcgaagacaccccggttagcggcaag
gtgacgggcactgacgtggacggcgatgcgctgacctacacgaagggcagcaatccttcg
aacggctctgtcactgtcaattcggatggcacgtatgtctacacgccgaacccggacttc
catgggacagacagcttcacggtgacggtgagcgacggccatggcggcacgacgaccagc
acggtgacggtgacggtctcgcccgtcaacgacgcgccgaaggcgcctgactacaacgag
acgacgaacgaagacacgccggtcagcggaagcgtggtcggcaccgacgtcgatggcgac
gcgctgacgtacgtgaagggcagtgatccggcgcacggcacggtcacggtcaatcccgat
ggcacgtatgtctacacgccgaacccgaatttcaacggcaccgacagcttcaccgtgacg
gtgagtgatggccatggcggtacgacgacgagcacggtgacggtgacagtcgatccggtc
aacgacgcaccgacggtgcccaactacaaccagaccacgaacgaagacacgcccgtcagc
ggccaggtcgtcggcagcgacgtcgatggcgacacgctgacgtacaccaagggcagcgac
cccgcgcatggcacggtcacggtcaacgctgatggcacgtacacctacaccccgggtgcc
aacttcaacggcaccgacagcttcaccgtgacggtgagcgacggccacggcggcaccacc
accagcacggtgaacgtgaccatcaacccgttcaacgacgcaccgacggtgcccaactac
aaccagaccacggacgaagacacgcccgtcagcggcaaagtcgttggcagcgacgtcgat
ggcgacacgctgacgtacaccaagggcagcgacccggcgcacggcacggtcacggtcaac
gccgatggcacgtacacctacacccccggcgcgaacttcaacggcaccgacagcttcacg
gtgacggtgagcgacggccacggtggcaccaccaccagcaccgtcaacgtgaccatcaat
ccggtcaatgacgctccgacagtccccaactacaccgagacgacgaacgaagacacgccc
gtcagcggacaagtgaccggcagcgacgtggatggcgacacgctgacttatgtgaagggt
agcgaccccgcgaacggcacggtgacggtcaatgcggacggcacctatacctacaccccg
aatgccaacttcaacggcaccgacacgttcaccgtcacggtgagcgacggccacggcggc
acgacgaccagcaccatcaccgtcacggtcgatccggtgaacgacgcaccgacggtcccc
aactacaccgagacgacgaacgaagacacgccggtcaacggccaggtcgtcggcagcgac
gtcgacggcgacgcgctgacctacaccaagggcagtgatccagcgcatggcacggtcacc
gtcaatgccgacggcacgtacacctacgttcccggcgccaacttccacggcacggacagc
ttcaccgtcacggtgagcgacggccacggcggcacgacgaccagcaccatcacggtcacc
gtcgatccggtgaacgacgcacccacggtgcccaactacaccgagaccacgaacgaagac
acgcccgtcaacggtcaggtcgtcggcagcgacgtcgacggcgacacgctgacctacacc
aagggcagcgatccggcgcatggcacggtcacggtcaacgcggatggcacctacacctac
gtccctggcgccaacttcaacggcaccgacagcttcacggtgacggtgagcgacggtcac
ggcggcaccaccaccagcaccgtcaacgtgaccgtcaacccggtcaacgatgcaccgacg
gtgcccaactacatcgagaccacgaacgaagacacccccgtcagcgggcaagtggtcggc
agcgacgtcgacggcgacacgctcacgtacgtgaagggcagcgatccagcgcacggcacc
gtcacggtcaatcccgacggcacgtacacctatgtccccggcgctaacttcaacggcacc
gacagcttcacagtcacggtgagcgatggccacggtggcacgaccaccagcaccgtgaac
gtgaccgtcaacccggtcaacgacgcaccgacggcgcccaactacaccgagaccacgaat
gaagacacgccggtcagcggccaggtcgttggcagcgacgtcgacggcgacacgctcacg
tacgtgaagggcagcgacccggcacatggcaccgtcacggtcaacgccgatggcacgtac
acctacgtccccggcgccaacttcaacggcaccgacacgttcaccgtcacggtcagcgac
ggccacggcggcacgacgaccagcaccatcacggtcaccgtcgacccggtgaacgacgcc
cccacggtgcccaactacgcgcagaccacggacgaagacacccccgtcagcggccaagtg
atcggcagcgacgtggacggcgacgcgctgacgtatgcactgggcaacggccctgcgcat
ggcagcgtcacggtcaacgccgacggcacctacacctacgtccccagcgcgaacttcaac
ggcaccgacacgttcaccgtcaccgtgagcgacggccacggcggcacgaccaccagcacg
gtgacggtcacgatcgacccggtgaacgacgcgccgacggtgcccaactacacccagacc
acggacgaagacacgcccgtcagcggccaggtcgtcggcagcgacgtcgacggcgacacg
cttacctacgtaaagggcagcgaccccacgaacggcacggtcacggtcaacgcggacggc
acctatacctacaccccgaatgccaacttcaacggcaccgacacgttcaccgtcacagtg
agcgacggccacggcggcacgaccaccagcaccgtcaccgtgacgatcgaccccgtcaac
gacgccccggtgttcgtcgacggcggcggcacgccggtcgacacggccaccggctacgtc
ttcggctacgacgagaaccgccccgcgggcaccgtgctcggcacggtccacgccaccgac
atcgacagcgcgaacgtcacctacagcatcctctcgggcaacgaccagggctacttcgcc
atcgacccggtcacgggcgagatcagcctcacgccggcaggcgctgcggctttcgtcaac
gactacgaagcaggcgccaacgcgcacgcgctggtgatcggcgcgaccgatggcacggcc
acgaccaccatccccgtcacgctcaacgagcagaacatcaacgacgcaccgacggtgccc
gactacgccaagaccacggacgaagacacacccgtcagcggccaggtcgtcggcagcgac
gtcgatggcgacgcactgacgtacgtgaagggcagcgacccggcgcatggcaccgtcaca
gtcaatgccgatggcacgtacacctacgtccccggcgccaacttcaacggcaccgacagc
ttcacggtgacggtgagcgacggtcacggtggaacgaccaccagcacggtgaatgtgacc
atcaaccccgtcaacgacgccccggtgttcgtcgacggcggcggcacgccggtggacagc
gccaccggctacgtcttcggctacgacgagaaccgcactgcgggcaccgtgctcggcacg
gtccaagccaccgacgtcgacagcgcgaacgtcacctacagcatcctctcgggcaacgac
gccggctacttcgccatcaaccccgccacgggcgagatcagcctcacgccggcaggcgct
gcagccttcgtcaacgactacgaagcaggcgccaacgcgcacgcgctggtggtcggtgcg
agcgacggcaccgtcacgacaaacatccccgtcacgctcaacgagcagaacgtcaacgag
gcgccagaggctcccgacgacaccaagaccacggacgaagacacgccggtcagcggccag
atcgtcggcagcgacgtcgacggcgacacgctcacctacgtgaagggcagcaacccgtcg
aacggcacggtgacggtgaaccccaacggcacctacacctacgttcccaacgccaacttc
aacggcaccgacagcttcaccgtcacggtgagcgacggccacggcggcacgaccaccagc
acggtgaccgtgaccgtcaacccggtgaacgacccgccgacggccacggcgaccgacgcc
ggcatcgtctccgaaggcagcctgcccggcggcattgcggcggtgggcgagccgtcggtg
caatcgaccggcaagatctccatcgcggaccccgacagcctggcgggcgacctgtcggtg
tcgctcagcggcccggccggcgtcacctccggcggccagccggtgtcgtggagctgggac
gcgggcacgcacacgctcacgggcagcgtcaccgtcgacggcgtcaccaccgaggtgatg
accgtggcggtgggcaacgtcaccgccacgggcgcggggcagttcgaggcgggctacacc
gtcacgctgaaggcgccgatcgaccacccggcgggcaacggcgagggcttgtcgaacctg
cacttcgaggccgtggtgagcgatggccagctcagcggcgcgccggtgggcttcaacgtg
ccggtcaaggacgatgcgccggtgctcgtgaacggcgagcagtccgtcgacgtggcaccg
atcaacacgaacctgatggtgatcctggacctctccgggagcatggaggaggagacgccg
acgcggctctcccgtgcgaaggcggccgtccagaacctgatcgacggctacgacttgtac
ggcgatgtgcgggtgcagctcgtcaccttcagcacgaccgggcacgcacaacaagcctgg
atgacggcagccgacgccaaggcgctggtgcaggacctgcaggccagtggcagcaccaac
tacgacgctgccctggcttcggcgatgagcggtttctcggctggcggcaagctgcagggt
gcccagaacgtgtcctacttcctcacggacggcgagccgacgcgtggggacggcaacccc
gaccagctcgggaacagcagcagcagcaacgcggctgacaagggcatccaggcagcggaa
gaagcgatctggaagaccttcctcaccaccaaccacatcaactcgttcgcactgggcctg
ggttccagcctgggcccgacggagcaggcctacatcgaccccatcgcctacaacggcaac
accggcacgaacaccaacggcaagatcgtcaccgacacgagccagctgaacgacatgctg
caaggcacgatcagcgtgccgcccacggtcagcaacctgctgaccggcggcctcggtggc
tcgtcgggcttcggtgccgacggcggccatgtgtccacgctgaccatcgacggcaccatc
tacgccttcgacagcagcacgggtgggatgacgaagaccggccccgccaccagcagcgac
tacagctacaaccaggcgacgcaccaggtcaccattgccaccgacaagggcggcaagctg
gtcgtggacttcgacactggcgagttcagctaccaggtggcaccgaaaaccaccgcctcg
caaaactacgacgagaccctcagctaccaggtcgtcgaccgcgacggcgatgcgagcaac
gtggccacgcagacgctgcacgtcaactacacgcctgcagcgggggcggcagcgctcttc
agctcggccgactcgctgggcctggccggcgtcgatgaagtgacggtgtcgatcgagcag
caacagcaaccgcacgatgcgccgcatttccccttcggcgacggtccggcgtggggcggg
ctgcagctgtccgacatgctgcagggcttcggcgccgccgagtcgctgcatgcgctgctg
caggccgcgttcccgccggccttcgggggcacacaggcgtctcccacggtgctgtcgctg
gcgtcctcggccgattcgctcgcggcctacgcaccgcccgtggcgccttcgctcgacgac
gagcttcacatgggcctcgcgcttcaccactga
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integrated database retrieval system
