Variovorax boronicumulans: CKY39_23465
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Entry
CKY39_23465 CDS
T05068
Name
(GenBank) nodulation protein
KO
K07789
multidrug efflux pump
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_23465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_23465
Transporters [BR:
vbo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKY39_23465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ATA55863
UniProt:
A0A250DPJ8
LinkDB
All DBs
Position
complement(5091549..5094809)
Genome browser
AA seq
1086 aa
AA seq
DB search
MNLSRPFVRRPIGTVLLTIGIALAGIAAFFVLPVSPLPQVDYPVISVRASIPGASPETMA
TSVATPLERHLGTIAGVNEMTSTSSVGSSRVTLQFDLSRNIDGAAREVQAAINASRVDLP
ATLRSNPTYRKANPAASPVIILALTSKTKTPGQIYDAVSNIVSQRLSQVDGVGDVEIGGG
SLPAVRIELLPFALNRYGISTEDVRAAIQASNANRPKGMVQGEGRKLQIYTQTPALRASD
YASMVVAWRNGAAVRLREVADVIDGVEDTRTLGLFNGEPAIIVLITRQPSANIIETVDNV
RALLPELQAQLPPDVTLQVASDSTNSIRSSLREVEMTLVIAVLLVVLVVSLFLRSVRATV
VPAVATVVALLGTFGVMHLLGFSLNNLSLMALTVATGFVVDDAIVVLENTSRHIESGMSR
MKAALLGAQEVGFTVLSISVSLVAVFIPLLFMGGQVGRLFREFAVTLSAAVLISLVISLT
TTPMMCAWMLKPGGEHDKNKPQGRFGRAAARSYDWMLKRYESALDWALDSKAIVMVVLLA
VVGLNVYLFSAAPKGFFPQQDSGQLNGGLRADQSISSQAMGAKLREVVDIIRKDEAVDTV
VGFTGGGRAGGGFMFVNLKPASQRKDSGLAVIARLRPQLAQVTGLRVFLGPVQDVRSGGR
SSNSTYQYTLKSDSLSDLRTWAVKLADEMKQQPTLTDIDTDQDQNGVETVAKVDRDSARR
LGLTSTAIDNALYNAFGQRQVATIYTELNQYHVVMEWAPGYTRSPNALRDVYVPATKTSV
VAGQAVTTQVAATTSTGGTTASASAAAATVPVSANAGSRNASTGNVLSNTATALVPLSAV
AKFEEQSVATSVSHEDGELATTISFNLAEGANLGDAREAIAKAEANIAMPTNVRGAFAGT
ALSAQQSQGQQAMLILAALVVIYIVLGILYESLVHPVTVLSTLPSAGVGAVLALLMFRME
FSIIALIGVFLLIGIVKKNAILIIDFALEAERSRGLSPLEAVREACLLRFRPILMTTLAA
ALGALPLAIGFGEGAELRRPLGVAIIGGLIASQLLTLLTTPVVYLLLDKLRRRGKNEHAL
SRAPAV
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtcgcgtcctttcgtccgccgccccataggcacagtcctcctgaccataggc
atcgccctggcaggaatcgcagcgttcttcgtcctaccagtctccccgctaccccaagtc
gactatccagtcatctcggtaagagcctccatcccaggagccagccccgagacgatggca
accagcgtcgcgacgccactagaaagacacctgggaaccatcgcaggcgtcaacgaaatg
acgtccaccagctccgtaggctcctcccgagtcacgctgcaattcgacctcagccgcaac
atcgacggcgccgcaagagaagtccaggccgccatcaacgccagccgcgtagacctgccc
gccacgctaagaagcaacccgacctaccgcaaagccaacccggctgcgtcgccagtcatc
atcctggccctcacgtccaaaacaaagaccccaggccagatctacgacgccgtctccaac
atcgtcagccagcgcctgtcgcaggtagacggcgtaggcgacgtagagatcggcggcggc
tcgctccccgcggtacgcatcgaactgctccccttcgccctcaaccgctacggcatcagc
accgaagacgtgcgcgccgccatccaggcgtccaacgccaaccgccccaagggcatggtc
cagggcgaaggccgcaagctgcagatctacacccagaccccggcgctgcgcgcgagcgac
tacgcctcgatggtcgtggcctggcgcaacggcgccgcggtacggctgcgcgaggtcgcc
gacgtgatcgacggcgtggaagacacgcgcacgctgggcctgttcaacggcgagccggcg
atcatcgtgctgatcacgcggcagccttcggccaacatcatcgagacggtcgacaacgtg
cgcgcgctgctgcccgagctgcaggcccaactgccgccggacgtgacgctgcaggtcgcc
tcggacagcaccaactccatccgcagctcgctgcgcgaggtggagatgacgctggtcatc
gcggtgctgctggtggtgctggtggtcagcctgttcctgcgcagtgtgcgcgcgacggtg
gtgccggcggtggccacggtggtggcgctgctgggcacgttcggggtgatgcacctgctg
ggcttcagcctcaacaacctgagcctgatggcgctcaccgtggccacgggcttcgtggtg
gacgacgccatcgtggtgctggagaacaccagccgccacatcgaatcgggcatgtcgcgc
atgaaggcggcgctgctcggcgcgcaggaagtcggcttcacggtgctgtcgatcagcgtg
tcgctggtggcggtgttcattccgctgctgttcatgggcgggcaggtggggcggctgttc
cgcgagttcgcggtcacgctgtcggcggcggtgctgatctcgctggtcatctcgctcacc
accacgccgatgatgtgcgcgtggatgctcaagcccggcggcgagcacgacaagaacaag
ccgcaaggccgcttcggccgcgcggcggcgcgcagctacgactggatgctcaagcgctac
gagagcgcactcgactgggcgctggacagcaaggcgatcgtcatggtcgtgctgctggcg
gtggtggggctcaacgtctacctgttcagcgcggcgcccaagggcttcttcccgcagcag
gacagcggccagctcaacggcggcctgcgcgccgaccagagcatttcgtcgcaggccatg
ggcgccaagctgcgcgaggtggtcgacatcatccgcaaggacgaggcggtcgacaccgtg
gtgggcttcacgggcggcgggcgcgcgggcggtggcttcatgttcgtcaacctgaagccg
gccagccagcgcaaggacagcggcctggccgtgatcgcgcggctgcgcccgcagctggcg
caggtgacggggctgcgcgtgttcctcggcccggtgcaggacgtgcgctcgggcgggcgc
tccagcaactccacctaccagtacacgctcaagagcgacagcctgtccgacctgcgcacc
tgggccgtgaagctggccgacgagatgaagcagcagcccacgctgaccgacatcgacacc
gaccaggaccagaacggcgtggagacggtggccaaggtcgaccgcgacagcgcgcggcgg
ctcggcctgacctccaccgccatcgacaacgcgctgtacaacgccttcggccagcggcag
gtggccaccatctacaccgagctcaaccagtaccacgtggtgatggaatgggcgccgggc
tacacgcgcagcccgaacgcgctgcgcgacgtgtacgtgccggccacgaagacctcggtg
gtggcggggcaggcggtgaccacgcaggtggcggcaacgacgtccacgggcggcacgacg
gcctctgccagcgccgccgccgcgacggtgccggtgtcggccaacgccggctcgcgcaac
gcctcgaccggcaacgtgctgagcaacacggccaccgcgctggtgccgctgtcggcggtg
gcgaagttcgaggagcagtcggtggccacgtcggtgagccatgaggacggcgagctcgcc
accaccatctcgttcaacctggccgaaggcgccaacctcggcgacgcgcgcgaggccatt
gccaaggccgaggccaacatcgccatgccgaccaacgtgcgcggcgcctttgccggcacc
gcgctgagcgcgcagcagtcgcagggccagcaggcgatgctgatcctggcggcgctggtg
gtgatctacatcgtgctgggcatcctgtacgagagcctggtgcatccggtgacggtgctc
tcgacgctgccctcggccggcgttggcgcggtgctggcgctcttgatgttccgcatggag
ttttccatcatcgcgctgatcggcgtgttcctgctgatcggcatcgtgaagaagaacgcc
attttgatcatcgacttcgcgctggaggccgagcgctcgcgcggcctgagcccgctcgag
gcggtgcgcgaggcctgcctgctgcgcttccgtcccatcctgatgaccaccctggccgcc
gcgctcggcgcgttgccgctggccatcggcttcggcgagggcgccgagctacgccggccg
ctgggcgtggcgatcatcggcgggctcatcgcgagccagctgctgacgctgctcaccacg
ccggtggtgtacctgctgctggacaagctgcgccgccgcggcaagaacgaacacgcgctg
agccgcgccccggccgtctga
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