Variovorax boronicumulans: CKY39_23475
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Entry
CKY39_23475 CDS
T05068
Name
(GenBank) multidrug transporter subunit MdtC
KO
K07788
multidrug efflux pump
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_23475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_23475
Transporters [BR:
vbo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKY39_23475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ATA55864
UniProt:
A0A250DNN5
LinkDB
All DBs
Position
complement(5095537..5098662)
Genome browser
AA seq
1041 aa
AA seq
DB search
MSPSRPFILRPVATSLLMLAIVLAGLVAFRFLPLAALPQVDYPTIQVQTLYPGASPEVMS
NTVTAPLERQFGQMSGLDRMSSTSAAGVSIITLQFSLGQTLDVAEQEVQAAINAGGSLLP
ADLPAPPVYAKVNPADAPVLTLAITSDTLPLTEVQNLVNTRLAQKISQVSGVGLVSLSGG
QRPAVRIQANTQALAANGIGLDSLRTAISAANSNGAKGSFDGPKRAYTINSNDQLLTVDD
YKNLIVSYKNGAPIRMVDVARVVNSAENTQLGAWAGRKVDGQVQLTPAIILNVQRQPGAN
VIATVNAIKKQLPELQAGMPAGLQVEVLSDRTAGIRSSVQHVEMELVLAVVLVVLVIFAF
LGSLRATVIASIAVPISLIGSFGLMYLLGYSLNNLSLMALTIATGFVVDDAIVMIENIAR
YIEEGEKPLQAAFKGAAQIGFTIISLTVSLIAVLIPLLFMGDVVGRLFREFAVTLAITIL
ISGVVSLTLVPMMSARWLKHEPKKDASGTGFGARAQRFFDGVMVRYDRSLHWVIAHQPLT
LLVALLTLVLTVLLYLTIPKGLFPTQDTGQLQARVQAAQDVSFDRMAQLQQQAARAILED
HDVENLSSFVGVDAANNTMLHTGSMLINLTRSHDNQQEVMDRLRERVRQVAGLTLYLQPT
QDLTIDAETGPTEYRVSLEGVNSALVTEWMQKLVAKLQESDKVRNVSSDAGAQGLAAYVN
VNRDTASRLSITASSVDDALYSAFGQRIVSTIFTETNQYRVILEAQPGMVNTPQTLGQLN
LIAGSGTATPLSAFAEISEQQAPLQITHVAQYPASTLNFDTAPGVSLGGSVAAIRAAAKE
IGLPSSVTMTFLGASGAYEKSLSNQLWLILAAVVCVYIVLGVLYESYVHPLTILSTLPSA
GVGALLALMLTGNDLGVIGIIGIILLIGIVKKNAIMMIDFAIDAERTQGKSAREAIHQAA
LLRFRPILMTTLAALFAAVPLMFSFGDGAELRRPLGLAIFGGLIVSQMLTLFTTPVIYLA
FDRLGGGSARASSSELEEEAA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctcgcgcccgttcatcctgcggccggtcgccacctcgctgctgatgctggcc
atcgtgctggccggcctggtggcgttccgcttcctgccgctggcggcgctgccgcaggtc
gactacccgaccatccaggtccagacgctctaccccggggccagccccgaggtcatgagc
aacaccgtcaccgcgccgctggagcgccagttcggccagatgtcgggcctggaccgcatg
agctcgaccagcgcggcgggcgtgtcgatcatcacgctgcagttctcgctgggccagacg
ctcgacgtcgccgagcaggaagtgcaggccgccatcaacgccggcggctcgctgctgccg
gccgacctgcccgcgccgccggtgtacgccaaggtcaacccggccgacgcgccggtgctc
acgctggccatcacttccgatacgctgccgctcaccgaggtgcagaacctcgtgaacacc
cggctcgcgcagaagatcagccaggtctcgggcgtgggcctcgtgtcgctcagcggcggg
cagcgcccggccgtgcgcatccaggccaacacgcaggcgctggcggccaacggcatcggg
ctggattcgctgcgcaccgcgatcagcgcggccaactccaacggcgccaagggcagcttc
gacggccccaagcgcgcctacaccatcaactcgaacgaccagctgctcacggtcgacgac
tacaagaacctcatcgtcagctacaagaacggcgcgccgatccgcatggtcgacgtggcg
cgcgtggtcaacagcgccgagaacacgcagctcggtgcctgggccggacgcaaggtcgac
gggcaggtgcagctcacgcccgccatcatcctgaacgtgcagcgccagcccggcgccaac
gtgatcgccaccgtcaacgccatcaagaagcagctgcccgagctgcaggccggcatgccc
gcgggcctgcaggtcgaggtgctgagcgaccgcaccgctggcatccgctcgtcggtgcag
cacgtcgagatggaactggtgctggccgtggtgctcgtggtgctggtgatcttcgccttc
ctgggcagcctgcgcgccaccgtcatcgccagcatcgctgtgccgatctctctcatcggc
agcttcggcctgatgtacctgctgggctacagcctgaacaacctgagcctgatggcgctg
accatcgccaccggcttcgtggtggacgacgcgatcgtcatgatcgagaacatcgcgcgc
tacatcgaggagggcgagaagcccctgcaggccgcgttcaagggcgcggcgcagatcggc
ttcaccatcatttcgctgaccgtgtcgctcatcgccgtgctgatcccgctgctgttcatg
ggcgacgtggtgggccgcctgttccgcgagttcgccgtgacgctggcgatcaccatcctg
atctcgggcgtggtctcgctcacgctggtgccgatgatgtcggcgcgctggctcaagcac
gagccgaagaaagacgcatcgggcaccggcttcggcgcgcgcgcccagcgtttcttcgac
ggcgtgatggtgcgctacgaccgctcgctgcactgggtgatcgcgcaccagccgctcacg
ctgctggtggcgctgctcacgctggtgctgaccgtgctgctgtacctcacgatccccaag
ggcctgttccccacgcaggacaccggccagcttcaggcccgcgtgcaggccgcgcaagac
gtgtccttcgaccgcatggcgcagctgcagcagcaggccgcgcgcgccatcctcgaagac
catgacgtcgagaacctcagctccttcgtcggcgtggacgcggccaacaacacgatgctg
cacaccggcagcatgctcatcaacctgacccgcagccacgacaaccagcaggaggtcatg
gaccgcctgcgcgagcgcgtgcggcaggtggcgggactcacgctgtacctgcagcccacg
caagacctgaccatcgacgccgagaccggaccgaccgagtaccgcgtgtcgctcgaaggc
gtgaacagtgcgctggtcaccgagtggatgcagaagctggtggcgaagctgcaggaatcg
gacaaggtgcgcaacgtgagcagcgatgccggtgcgcaggggctggcggcgtatgtgaac
gtgaatcgcgacacggcgtcgcggctgtcgatcactgcgagttcggtggatgacgcgctg
tacagcgccttcgggcagcgcatcgtgtcgacgatcttcaccgagacgaaccagtaccgc
gtgattctggaagcgcagcctggcatggtgaatacgccgcagacgctggggcagttgaac
ctcattgcggggtcgggcacggcgacgccgttgtctgcgtttgcggagatcagcgagcag
caggctccgctgcagatcacgcacgtggcgcagtacccggcgagtacgttgaacttcgat
acggcgccgggggtttcgctcggtggatcggttgccgcgattcgcgcggctgctaaagag
atcgggctgccgagcagtgtgacgatgacttttctgggggcttcgggggcctatgagaag
tcgttgtcgaaccagctgtggttgattctggcggcggtggtttgtgtgtacatcgtgctg
ggggtgctgtacgagagctatgtgcatccgttgacgatcttgtctacgttgccttctgcg
ggggttggggccttgttggccttgatgctgaccggcaatgacctgggggtgatcgggatc
atcgggatcatcctgctgatcggcatcgtgaagaagaacgcgatcatgatgatcgacttt
gctattgatgctgagaggacgcaggggaagtcggcccgtgaggcgattcatcaggctgcg
ttgttgcggtttcggccgatcttgatgactacgttggcggctttgtttgctgctgtgccc
ttgatgttcagttttggggacggggctgaattgcgacgtcctctcgggcttgcgatcttt
ggcgggttgatcgttagtcagatgctgactttgttcactacgcctgttatttatctggcg
tttgatcggttgggtggggggagtgctcgggcttcttcttctgagcttgaggaggaggcg
gcttga
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