Variovorax boronicumulans: CKY39_23720
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Entry
CKY39_23720 CDS
T05068
Name
(GenBank) LysR family transcriptional regulator
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbo03000
]
CKY39_23720
Transcription factors [BR:
vbo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CKY39_23720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_23
HTH_24
HVO_A0261_N
Cro
HTH_28
MarR
HTH_3
FilR1_N
Sigma70_r4_2
HTH_50
HTH_6
Motif
Other DBs
NCBI-ProteinID:
ATA55908
LinkDB
All DBs
Position
complement(5144760..5145662)
Genome browser
AA seq
300 aa
AA seq
DB search
MKPNQLHAFVAVVEQLSIRAAARVLGISQPAVTKIVRELEREVGAPLVERSVKGVRLTQF
GLAFAPRARLLLADMERARDEIAQIRDGATGSVSLAVSASFALTVLPAAFKDFHTRLPAV
DVQFSEAVLPWMLARLRDGYLDFAVAHIVPGTLDPQFEALELFPVQLVVGLRERHPLRNA
RSLNDLYAAEWVLPGDDHGGTNAVAPLFTPLGLPPPTRVLQGHSVTVALALVGHMDLIGL
FVEPLAGLSFKRHGIRRVDVCETLPMLNVCVVRRRGQPSTPAAQHFIECIQRASAAAMKV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccaatcagttgcatgccttcgtggccgtggtcgagcagctcagcatccgcgct
gccgcgcgcgtgctcggcatttcgcagccggccgtgaccaagatcgtgcgcgagctggag
cgcgaggtcggcgcgccgctggtggagcgcagcgtcaagggcgtgcggctcacgcagttc
ggcctggccttcgcgccgcgcgcgcggctgctgctggccgacatggaacgcgcccgcgac
gagattgcgcagatccgcgacggcgccaccggctccgtttcgctggccgtgagcgcctcg
ttcgcgctcaccgtgctgcccgccgccttcaaggacttccacacccgcctgccggcggtc
gacgtgcagttcagcgaggccgtgctgccgtggatgctcgcgcggctgcgcgacgggtat
ctcgacttcgcggtggcgcacatcgtgcccggcacgctcgatccgcagttcgaggcgctg
gagctgttcccggtgcagctggtggtcggcctgcgcgagcgccatccgctgcgcaacgcg
cgctcgctgaacgacctttatgccgccgaatgggtcctgccgggcgacgaccatggcgga
accaacgccgtggcgccgctgttcaccccgctcgggctgccgccgcccacgcgcgtgctg
cagggccactcggtcaccgtggcgctcgcgctggtgggccacatggatctgatcggcctc
ttcgtcgagccgctggccgggctgagcttcaagcgccacggcatccgtcgcgtcgacgtg
tgcgagacgctgccgatgctgaacgtgtgcgtggtgcgccggcgcgggcagccgtcgacg
ccggcggcgcagcacttcatcgagtgcattcagcgggcgtcggcggcggcgatgaaggtg
tag
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