Variovorax boronicumulans: CKY39_23980
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Entry
CKY39_23980 CDS
T05068
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
vbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_23980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKY39_23980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vbo03000
]
CKY39_23980
Transcription factors [BR:
vbo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CKY39_23980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_29
MarR_2
Xre-like-HTH
HTH_3
HTH_23
HTH_11
DUF1670
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ATA55953
UniProt:
A0A250DPS3
LinkDB
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Position
complement(5193774..5194502)
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AA seq
242 aa
AA seq
DB search
MPRSSPSSSASPAAPDAQPSPVHNSDMRLADDVQQRLLAVAHRRTLVRGESLFHKGSSPD
ALFGVVSGSLRVSVVAPGGREAVIAMLEPGHWFGEVSLLVGRERVYDTCAVDTTEMAVVA
AADFHRLVADHPDVHMAFTRLVCLRLRQALAWIDDVILMPLPVRLAHRLLTLDARAVAPT
EEGGGTLLGVSQEDLSFMLGVSRQSVNRQLKLWEEDGTLRVRYRSIELLDRAQLERHAAT
PR
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctcctccccttcttccagcgccagccccgccgcgccggacgcgcagccttcg
cccgtgcacaacagcgacatgcggctggccgacgacgtgcagcagcgcctgctcgcggtg
gcgcaccggcgcacgctggtgcgcggcgaatcgctgttccacaagggctcgtcgcccgac
gcgctgttcggcgtggtcagcggctcgttgcgcgtgagcgtggtcgcgccgggcgggcgc
gaagcggtgatcgcgatgctcgagccgggtcactggttcggcgaggtctcgctgctggtg
gggcgcgagcgcgtctatgacacctgcgccgtcgacaccaccgagatggccgtggtcgcg
gcggccgacttccaccggctggtggccgaccatcccgatgtgcacatggccttcacacgg
ctcgtgtgcctgcggctgcgccaggcgctggcctggatcgacgacgtgatcctgatgccg
ctgcccgtgcggctggcgcaccggctgctcacgctggatgcgcgcgcggtcgcgccgacc
gaggaagggggcggcacgctgctgggcgtgtcgcaggaagacctgtcgttcatgctcggc
gtgtcgcgccagagcgtgaaccgccagctcaagctgtgggaggaagacggcacgctgcgc
gtgcgctaccgcagcatcgagctgctcgaccgcgcgcagctggagcggcacgcggccacg
ccgcgctga
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