Variovorax boronicumulans: CKY39_24120 Help Entry CKY39_24120       CDS       T05068                                  Name (GenBank) RNA helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism vbo  Variovorax boronicumulans Pathway vbo03018   RNA degradation Brite KEGG Orthology (KO) [BR:vbo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CKY39_24120  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vbo03019]     CKY39_24120 Enzymes [BR:vbo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      CKY39_24120 Messenger RNA biogenesis [BR:vbo03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      CKY39_24120 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII P-loop_SecA CMS1 Motif Other DBs NCBI-ProteinID:  ATA55980 UniProt:  A0A250DNR5 LinkDB All DBs Position 5219327..5221132 Genome browser AA seq 601 aa AA seqDB search MNFDELKLAPAILKAVHEHGYDTPTPIQAQAIPVVLDGHDLLGGAQTGTGKTAAFTLPML HKLTMSRSATNKFGGIGIRALVLTPTRELAAQVEESVRTYGKYLQLDSTVIFGGVGMNPQ ISKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKILALVP KEKQSLLFSATFSDEIRDLAGSLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKALLAH IINENKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGDIRA LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCLDEEGFMQ EIERFTKQTIPVQKVEGFGPEEGERAEPIAMGRQTIWGGAGRPPSREVMQAAAKAARTEM MSRIRENKAGQGGGNGGGGGGNGGGQRRGGGQGGGGQGRNANGGGQGQGQGPRGQGAARP AQGRGPQQGQPRAPQQPHHHAPHEERQPRHHGNSHSPTQANQVAHLRAEAVAGGGAGQPD PLRTSVDHMGGRGRGGRPGGGGGYGGNRSGGGGRSGGGGGGYGGGGGGRSGGGGGGRSFG R NT seq 1806 nt NT seq  +upstreamnt  +downstreamnt atgaattttgacgaactgaagctggctcccgccatcttgaaggctgtgcacgagcacggc tacgacacccccacccccatccaggcgcaagccattcccgtggtcctcgacggccacgac ctgctgggcggcgcccagaccggcaccggcaagaccgcggccttcaccctgccgatgctg cacaagctcaccatgagccgcagcgccaccaacaagttcggcggcatcggcatccgtgcc ctcgtgctgacccccacgcgtgaactcgcggcccaggtcgaagagtcggtgcgcacctac ggcaagtacctgcaactcgactccaccgtgatcttcggcggcgtgggcatgaacccgcag atcagcaagctcaagaagggcgtcgacatcctcgtggccacccccggccgcctgctcgac ctgcagcaacagggcatgctcgacctgagccaggtccagatgctgatcctggacgaagcc gaccgcatgctggacatgggcttcatccacgacgtgaagaagatcctggccctggtgccc aaggaaaagcagagcctgctgttctcggccaccttcagcgacgagatccgcgacctcgcc ggctcgctgctcaagaacccgcagagcatccaggtcacgccgcgcaacaccacggtgcag cgcatcacgcaggtgatccaccccgtgggccgcggcaagaagaaggcgctgctcgcgcac atcatcaacgagaacaagtggagccaggtgctcgtgttcacgcgcaccaagttcggcgcc aacagcgtggccgaattcctcaccaagaacggcatcgaggcgatggcgctgcacggcaac aagagccagagcgcccgcacgcaggcgctggccggcttcaagagcggcgacatccgcgcc ctggtggccaccgacatcgccgcccgcggcatcgacatcgacgagctgccgcacgtcgtg aactacgagatcccgaacgtcagcgaagactacgtgcaccgcatcggccgcaccggccgc gccggttcgagcggcgaggccgtgagcttcgtgtgcctggacgaagaaggcttcatgcag gaaatcgaacgcttcacgaagcagacgatcccggtgcagaaggtcgagggcttcggtcct gaagaaggcgaacgcgccgagccgatcgccatgggtcgccagacgatctggggcggcgcc ggccgtccgccgagccgcgaagtcatgcaggcagccgccaaggccgcccgcaccgaaatg atgtcacgcatccgtgagaacaaggccggccagggtggcggcaacggcggtggtggcggc ggcaatggcggcggtcaacgccgcggtggcggccagggtggcggcggccaaggccgcaat gccaacggtggcggccaaggccagggtcagggcccgcgcggccagggcgcagcccgtccc gcacagggccgcggcccgcagcaaggccagccgcgcgcaccgcagcagccccatcaccac gcaccgcacgaagagcgccaaccgcgccatcacggcaacagccacagcccgacgcaggcc aaccaggtcgcgcacctgcgcgccgaagccgttgcaggcggcggcgccggccagccggac ccgttgcgcacgagcgtcgaccacatgggtggtcgcggtcgcggcggccgtccgggcggc ggtggcggctacggcggcaaccgttcgggtggcggtggccgctcgggtggtggcggtggt ggctacggcggtggcggtggtggccgctccggcggcggcggtggcggtcgttcgttcggt cgctga

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