Variovorax boronicumulans: CKY39_24295
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Entry
CKY39_24295 CDS
T05068
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_24295
Transporters [BR:
vbo02000
]
Other transporters
Pores ion channels [TC:
1
]
CKY39_24295
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ATA56012
UniProt:
A0A250DP20
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All DBs
Position
complement(5253170..5255266)
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AA seq
698 aa
AA seq
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MTPQFRRNAIGAAVLSLASVASLAQTADTAAAPAADSASLREVTVTGNPLGASDLIAPTT
SLSGDQLLLRSESTLGETLNNLPGVSSSYFGPNASRPSIRGQDGDRIRILQNGGGAPDAS
ALSYDHAVPVDALVTERIEVLRGPSALQYGGSAVGGVVNVIDNRIPTEPINGFGGRAELG
YASGNKEKSGGVLLEGGNDRFALHVDAFNRDSKDVAVPVDLECSKPGRLSLARRICNSQN
EAHGGAVGGTLFFSQGWIGASASTYRSNYGTVAEDEVTIGMKSDRYALEGEWRPGGFIRS
IHAKVSRTDYRHTEFEGREAGTTFSNLSNDLRIEARHEKIGNLEGLVGFSRETNRFAADG
SEAFAPHSRTRSNALFLHEELGTSWGRLSFGARTERVTVRSLGYPDDLSVTRFAIGERTF
NPHSAAFGALVNLTPQWQLTSNLAYTERAPKDYELLANGPHVATAAWEVGDPNLGKEKST
GFDLGAQWKSGPNTARVNAYVTRFRNYIGLTASGRTLDEEGQVVTDPEATDTLAEYRYGG
MRARFTGIEANGNLRLLGADGFARMADAGTLDLEWRGDIVRAKNLDTGEPLPRIAPLRLG
ATLAYGNGPWTARVGFDYNAAQRRVPSVGARETDAYTLWNASISYRMRVQRANLTWYARM
DNIGNTLAYTPTSILTTTVFPKAPLPGRSLKVGLRVTF
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaccccccaattccgtcgcaacgccatcggcgctgccgttctttcgctcgcctcggtg
gcgagcctggcccagaccgccgacaccgccgccgccccggctgctgactcagccagcctg
cgcgaggtcaccgtcaccggcaacccgctgggcgcgagcgacctgatcgcgccgaccacc
tcgctgtcgggcgaccaactgctgctgcgctccgaatcgacgctgggcgaaacgctgaac
aacctgcccggcgtgagcagcagctacttcggccccaacgccagccgccccagcatccgc
gggcaggacggcgaccgcatccgcatcctgcagaacggcggcggcgcgcccgacgcctcg
gcgctgagctacgaccacgcggtgcccgtcgacgcgctggtgaccgagcgcatcgaggtg
ctgcgcggcccctcggcgctgcagtacggcggcagcgccgtgggcggcgtggtcaacgtg
atcgacaaccgcatcccgaccgagcccatcaacggcttcggcggccgtgccgagctgggc
tacgccagcggcaacaaggaaaagagcggcggcgtgctgctcgaaggcggcaacgaccgc
ttcgccctgcacgtcgatgccttcaaccgcgactcgaaggacgtggcggtgccggtcgac
ctcgagtgcagcaagcccgggcgtctgtcgctcgcgcgccgcatctgcaactcgcagaac
gaggcgcacggcggcgcggtcggcggcacgctgttcttcagccagggctggatcggcgcc
tcggccagcacctaccgcagcaactacggcaccgtggccgaggacgaggtgaccatcggc
atgaagtccgaccgctacgcactggaaggcgagtggcgcccgggcggcttcatccgcagc
attcacgcgaaggtgagccgcactgactaccgccacaccgagttcgagggccgcgaggcc
ggcaccaccttctcgaacctgagcaacgacctgcgcatcgaggcgcggcacgaaaagatc
ggcaacctcgaaggcctggtcggcttcagccgcgagaccaaccgcttcgccgccgacggc
tcggaggccttcgcgccgcacagccgcacgcgctccaacgcgctgttcctgcacgaagag
ctcggcacctcgtggggccgcctgagcttcggcgcccgcaccgagagggtcacggtgcgc
tcgctgggctaccccgacgacctgtcggtgacgcgcttcgccatcggcgagcgcaccttc
aacccgcacagcgcggcgttcggcgcgctggtcaacctcacgccgcagtggcagctgacc
tcgaacctggcctacaccgagcgcgcaccgaaggactacgagctgctcgccaacggcccg
cacgtggcgaccgcagcttgggaagtgggcgacccgaacctgggcaaggaaaagtccacc
ggcttcgacctgggcgcgcagtggaagtcgggcccgaacacggcccgcgtgaacgcgtac
gtcacgcgctttcgcaactacatcggcctgaccgcgtcgggccgcacgctcgacgaggaa
gggcaggtcgtcaccgaccccgaagcgaccgacacgctggccgagtaccgctacggcggc
atgcgcgcgcgcttcaccggcatcgaggccaacggcaacctgcggctgctgggcgccgac
ggctttgcgcgcatggccgacgcgggcacgctcgacctcgaatggcgcggcgacatcgtg
cgcgccaagaacctcgacaccggcgagccgctgccgcgcatcgcaccgctgcgcctgggc
gccacgctggcctacggcaacgggccgtggaccgcgcgcgtcggcttcgactacaacgcg
gcgcagcgccgggtgccgagcgtgggcgcgcgcgagacggacgcgtacacgctgtggaac
gcgtccatcagctaccgcatgagggtgcagcgcgccaacctcacctggtacgcgcgcatg
gacaacatcgggaacacgctggcctacacgccgacctcgatcctgacgaccacggtgttc
ccgaaggcgccgctgccggggcgttcgttgaaggtgggtttgcgcgtcacgttctga
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