KEGG   Variovorax boronicumulans: CKY39_24365
Entry
CKY39_24365       CDS       T05068                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vbo  Variovorax boronicumulans
Pathway
vbo00061  Fatty acid biosynthesis
vbo00071  Fatty acid degradation
vbo01100  Metabolic pathways
vbo01212  Fatty acid metabolism
vbo02024  Quorum sensing
vbo04146  Peroxisome
Module
vbo_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CKY39_24365
   00071 Fatty acid degradation
    CKY39_24365
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CKY39_24365
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CKY39_24365
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vbo01004]
    CKY39_24365
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vbo04147]
    CKY39_24365
Enzymes [BR:vbo01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CKY39_24365
Lipid biosynthesis proteins [BR:vbo01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CKY39_24365
Exosome [BR:vbo04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CKY39_24365
  Exosomal proteins of breast cancer cells
   CKY39_24365
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ATA56023
UniProt: A0A250DQ01
LinkDB
Position
5267663..5269273
AA seq 536 aa
MPAARTEPTPSSSFQRIARIALGDVIHRSARRFGARTALIEGEHRMSYSELDAASNRFAH
HLLGLGLASGERVAMLCNNSIEMVVALLGIQKAGLVWVPINTALAVDAIGYILEHAETRH
LVIDTALHAKPELRQLLDTAGVSPLLCVLDGDTPPPGVPTVAQAIAQGPATLPDVAIDSD
QLALIMYTSGTTGRQKGVMHSHASVHSVLQSNMLEWGGGPAHHDVWSNVLPLFHCGQHTV
LMSALAVGGTNVILRGFDPGAMLAAIERHRITVTVGLPMMYGALLAHPQRESRDLSSLRL
CVYAMAPMSRTLLLRLLDALCPNFALASGQTEMYPGATIFETHQQRERFGSYWGVGTLVN
EVAVMGDEGELLAPNQVGEIVFRGPNVMLGYYKDPQATAHAQRFGWHHSGDLGKLDDDGQ
LIFLDRLKDMVKSGGENVPSLKVEEVLLRHPGVLNAAVVGLPHERWGEAITAFVTRRPDA
PVELSEATLTAHCKEHLGGFEVPKDIVFLPALPMTSTGKIQKFELRQTHQGHYQRD
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgcccgccgcccgtaccgagcccacgccctcctcctccttccaacgcatcgcccgcatc
gcgctgggcgacgtgatccaccgcagcgcgcggcgcttcggtgcgcgcaccgcgctcatc
gaaggcgagcaccgcatgagctacagcgagctcgacgccgcatcgaaccgcttcgcgcac
caccttctgggcctgggcctggccagcggcgagcgcgtggccatgctgtgcaacaactcg
atcgagatggtggtcgcgctgctcggcatccagaaggccgggctggtgtgggtgccgatc
aacacggcgctcgcggtcgatgccatcggctacatcctcgaacacgccgaaacgcggcac
ctggtgatcgacaccgcgctgcacgccaaacccgaactgcgccagctgctcgacacagcg
ggcgtctcgccgctgctgtgcgtgctcgacggcgacacgccgccgcccggcgtgcccacc
gtggcgcaggccatcgcgcagggccccgccacgctgcccgacgtggccatcgacagcgac
cagctcgcgctcatcatgtacacgagcggcaccaccggccggcagaagggcgtgatgcat
tcgcacgcctcggtgcactcggtgctccagagcaacatgctcgaatggggcggcggcccc
gcgcaccacgacgtgtggagcaacgtgctgccgctgtttcactgcgggcagcacacggtg
ctgatgtcggcgcttgcggtgggcggcacgaacgtcatcctgcgcggcttcgaccccggc
gcgatgctcgccgccatcgagcgccacaggatcacggtgacggtcggtctgccgatgatg
tacggcgcgctgctggcccacccgcagcgcgaatcgcgcgacctgtcgagcctgcggctg
tgcgtgtatgcgatggcgccgatgtcgcgcacgctgctgctgcgcctgctcgatgcgctg
tgcccgaacttcgcgctggcctcggggcagaccgagatgtaccccggcgccaccatcttc
gagacgcaccagcagcgcgagcgcttcggctcgtactggggcgtgggcacgctggtgaac
gaggtcgcggtgatgggcgacgagggcgagctgctcgcaccgaaccaggtcggcgagatc
gtctttcgcgggccgaacgtgatgctcggctactacaaggacccgcaggccacggcgcat
gcgcagcgcttcggctggcaccactcgggcgacctgggcaagctggacgacgacgggcag
ctgatctttctcgaccggctcaaggacatggtcaagtcgggcggtgagaacgtgccctcg
ctcaaggtcgaggaggtgctgctgcgccacccgggcgtgctcaacgcggcggtggtcggc
ctgccgcacgagcgctggggcgaggccatcacggccttcgtcacgcgccggcccgatgcg
ccggtggagctctcggaagccacgctcacggcgcactgcaaggagcaccttggcggcttc
gaggtgcccaaggacatcgtcttcctgcccgcgctgccgatgacctcgacgggcaagatc
cagaagttcgagctgcgccagacccaccaggggcactaccagcgcgactga

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