Variovorax boronicumulans: CKY39_24475
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Entry
CKY39_24475 CDS
T05068
Name
(GenBank) polyketide synthase
Organism
vbo
Variovorax boronicumulans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
KAsynt_C_assoc
PP-binding
adh_short
Beta-ketacyl_N
adh_short_C2
Thiolase_N
Epimerase
Motif
Other DBs
NCBI-ProteinID:
ATA56044
UniProt:
A0A250DP60
LinkDB
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Position
complement(5311910..5316532)
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AA seq
1540 aa
AA seq
DB search
MTPTFNESAEPTGLEIAIVGLSGCFPGADDVDAFWHNIQGGVESVSRFTDEQLRERGVPQ
SLLDDPDYVKAGVMFEGFDQFDAGFFGYTPREAENLDPQQRVFLECASAALEHAGCDPER
WPGKVGVYAGEGANVYLIRNLLPSFGLGAHTGIADLLGLMNGNGSGSLCTRVAYKLNLRG
PAVSVQTACSTSLTAVHTACQALLSHDCDMALAGGVWLNLLQEGGYRYQAGAILSPDGHC
RAFDADAAGTVIGSGAGVVVLKRLDEALRDGDTIHAVIKGTAANNDGSAKVGFTAPSIDG
QAEVIRAAQLIAGVSADTIGYIETHGTGTTLGDPIEIAALTQAFRADTERRGFCAVGSVK
TNIGHLDAAAGVAGLIKATMALKHGVLPPSLHFKKPNPQIDFANSPFHVNAQRQPWPQGR
TPRRAGVSSFGIGGTNVHVVLEEAPRARSAQGKASPWQVLPLSAKDAGALKEGRERLAVH
LRESGEEQSLADVAFTLQEGRKPFAWRSAVVANQPAMAAEMLAAAPALAPKPVTTAPEVV
FLFPGSGTQHALMGADLYRESTVFREEMDRCFALLRKDSGVDLQSLLFPPAGGESAANER
LLRVEFAQPALFVVGYAMARWWMHCGIKPALMLGHSLGEYVAACLAGVFSLQDALRIVAA
RGRLLQTVVPGAMTAVSLSEKELAPWLAMGCDLAAVNGEALCVLSGPVDAIERVEEALRA
KQHVPRRLHVSIAFHSHLVDPVVAELERVVAAVLRSAPAIPFLSNASGKPITAQEATDPA
YWGRHLRGAVRFAEGLREIFATPGRAVLEVGPGETLAGLARLHADSTSAAGIWASQAHPQ
QLARNAPQLANAMAGLWTVGVDIDWAACRNGESRRRVPLPTYAFRRQRFWVDPAAASQQP
VQAGPASPFYVPAWKRTALPPRAEQPTVARSGCTLILGDANSFTDRLARTLRGQGVPVVV
ALRGKAFARTAALQYALRPAERADHARLLREAEAEAGAVTQVFHLWSLDAGCPAASQAEV
FERGYFSLLALAQALDDAGGSQRAPLALTVIADGIEDVAGTEALSPEKATLRGLAKVLGQ
ESPSIACRIVDVVLPAPESAAESELARRVVEEAAASHEEAVVAYRGPHRWTKGYEALAVD
TPGMQRLRKGGVYLITGGLGGVGLALARHLGKTWQARLVLLGRTPMPERSGWARLAEAAD
QPLALRRRLQQLIELEAAGIEVLTVAADVTDSAQLRSALAAVHARFGAVNGVVHAVIEPD
HGMVSQRTQAQVEAAFAPKVVGTRALLDAVASEPLDFVLFCSSIATLLGGLGLSDYAAAN
DYLDAFASAHRRSSALPVFSVNWDAWRDVGAAAGKDMPEGMGLDERTGVLAFERIVNGPD
LPQVVVSASPLAPRLRPLRGLLDAMDDAPEAAAPARAGHPRPVLQTAFVAPEGDLEEGLA
ELWTEALGIAPVGVNDNLFELGGDSLLAIRLLSKVRKAYGVDLAPAVFFKAPTVAELAAL
VELRLIEDIEAAGLDDEAGETGEKGRDGDRLGRSTASFPS
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atgacccccaccttcaacgaatccgccgagcccaccggtctcgagatcgccatcgttggc
ctgtccggctgcttccccggcgccgacgacgtggacgccttctggcacaacatccagggc
ggcgtggaatcggtgtcgcgcttcaccgatgagcagttgcgcgaacgcggcgtgccgcag
agcctgctggacgaccccgactacgtgaaggccggcgtgatgttcgaaggcttcgaccag
ttcgatgccggcttcttcggctacacgccccgcgaagcagagaacctcgacccgcagcag
cgcgtgtttctcgaatgcgcctcggccgcgctcgaacacgccggctgcgaccccgagcgc
tggccgggcaaggtcggcgtctacgcgggcgagggcgccaatgtctacctgatccgcaac
ctgctgccgtccttcggcctcggcgcgcacacgggcatcgccgacctgctcggcctgatg
aacggcaacggcagcggctcgctgtgcacacgcgtggcctacaagctcaacctgcgcggc
cccgccgtgagcgtgcagaccgcctgctccacctcgctcacggccgtgcacaccgcctgc
caggcactgctgagccatgactgcgacatggccctggccggcggcgtgtggctcaacctg
ctgcaagagggtggctaccgctaccaggccggcgcgatcctctcgcccgatggccattgc
cgcgccttcgacgccgatgccgccggcacggtgatcggcagcggcgccggcgtggtcgtg
ctcaagcgcctcgatgaagcactgcgcgacggcgacaccatccatgccgtcatcaagggc
accgcggccaacaacgacggctccgccaaggtcggcttcactgcgcccagcatcgacggg
caggccgaggtcattcgcgcggcgcaactgatcgcgggcgtctcggccgacaccatcggc
tacatcgagacgcacggcactggcaccacgctgggcgaccccatcgagatcgcggcgctc
acgcaggccttccgtgccgacaccgagcggcgcggcttctgcgccgtcggttcggtcaag
accaacatcggccacctcgatgcggcagccggcgtggcggggctcatcaaggccacgatg
gcgctcaagcacggcgtgctgccgcccagcctgcatttcaagaaacccaatccgcagatc
gatttcgcgaacagcccgttccatgtgaacgcgcagcgccagccctggccccaaggtcgc
acgccgcgccgcgcgggcgtgagctcgttcggcattggcgggaccaatgtgcatgtggtg
ctcgaagaggcgccgcgcgcgcgctccgcgcaaggcaaggcatcgccgtggcaggtgctg
ccgttgtcggccaaggacgcaggcgcgctcaaggaaggccgtgagcgcctggccgtgcat
ctgcgcgaatccggcgaagagcagtcgctggcggacgttgccttcacgcttcaggaagga
cgcaaacccttcgcatggcgcagcgcagtggtcgcgaaccagcccgcgatggccgccgag
atgctcgccgcagcccccgcgctcgcgccgaagcccgtgaccacggcgcccgaagtcgtg
ttcctgtttcccggcagcggcacgcagcacgcgctcatgggcgcggacctctaccgcgag
agcaccgtgtttcgcgaggagatggaccgctgcttcgcgctgctgcgcaaggacagcggc
gtcgacctgcagtcattgctgtttccgccggcaggcggggagtctgccgccaatgagcgc
ctgctgcgtgtcgagttcgcgcaacccgcgctcttcgtcgtcggctacgcgatggcgcgc
tggtggatgcactgcggcatcaagcccgcgctgatgctcggccacagccttggcgaatac
gtcgcggcatgcctggccggcgtgttctcgctccaggacgcactgcgcatcgtggccgcg
cgcggccgcctgctgcagacggtggtgccgggcgcgatgaccgccgtgtcgctttccgaa
aaggagctggcgccttggctcgccatgggctgcgatcttgccgcggtgaacggcgaggcg
ctctgcgtgctctccggcccggtggatgcgatcgagcgcgtcgaggaggcgctgcgcgcg
aagcagcatgtgccgcgccgcctgcatgtgtccattgccttccattcacacctcgtcgat
ccggtggtcgcggaactggagcgcgttgtggccgcggtgctgaggagcgcacccgccatt
ccatttctctccaatgcttcgggcaagccgatcacggcgcaggaagccaccgaccccgcc
tactgggggcggcatctgcgtggcgcggtgcgcttcgccgagggcctgcgcgagatcttc
gcgacgcccggccgcgcagtgctcgaagtcggtccgggcgagacgctcgccggtctcgca
cggctgcatgccgacagcacctcggccgccggcatctgggccagccaggcccatccgcag
cagctcgcacgcaatgcgccgcagctggcgaacgcgatggcgggcctgtggaccgtgggc
gtggacatcgactgggcggcctgccgcaatggcgagagccggcgccgcgtgccgttgccg
acctatgccttccggcgccagcggttctgggtcgatcccgcggcagcctcgcagcagccc
gtgcaagccgggcccgcaagtcctttctacgtgcccgcgtggaaacgcacggcactgccg
ccgcgcgccgagcagcccacggtggcccgctcgggctgcacgctgatcctcggcgatgcc
aacagcttcaccgaccgcctcgcacgcacgctgcgtgggcagggcgtgccggtggtcgtt
gcgctgcgcggcaaggccttcgcgcgcaccgccgcgttgcagtacgcgctgcggcccgcc
gagcgcgccgaccatgcgcggctcctgcgcgaggccgaagccgaggctggtgcggtgacg
caggtgttccatctgtggagcctcgatgcggggtgccccgctgcctcgcaggccgaggtc
ttcgagcgcggctatttcagcctgctcgcactggcccaggcgctcgacgacgccggtgga
tcgcaacgcgcacctctggcgctgaccgtgatcgccgacggcatcgaggacgtcgccggc
accgaggccctttcgcccgagaaggccacgctgcgcggcctggccaaggtgctgggccag
gagtcgccgtcgatcgcctgccgcatcgtggatgtggtgctgccggcgcccgagagcgcg
gccgagagtgagcttgcacgccgcgtggtcgaagaggcggcggcatcgcacgaggaagcc
gtcgtcgcgtaccgcggtccgcaccgatggaccaagggctacgaagcgctcgcggtggat
acgccgggcatgcagcgcctgcgcaagggcggcgtgtatctcatcaccggcgggctcggc
ggcgtgggcctcgcgctcgcgcgccacctcggcaagacatggcaggccaggctggtgctg
ctgggccgcacgcccatgcccgagcgcagcgggtgggcgcgccttgccgaagcggccgac
cagccactggcgctgcgccgccggctgcagcaactcatcgagctggaggcggccggcatc
gaggtgttgaccgtggccgccgatgtgaccgactccgcccaactgcgcagcgcattggcg
gcggtgcatgcgcgtttcggcgcggtgaacggcgtcgtccacgccgtcatcgaacccgac
cacggcatggtctcgcaacgcacgcaggcgcaggtcgaagcggcattcgcacccaaggtg
gtgggcacgcgcgcgttgctcgacgcggtggcttcggagccgctggacttcgtgctcttc
tgctcctcgatcgcgacgctgcttggcggcctcggcctcagcgactacgccgcggccaac
gactacctcgacgccttcgcgagcgcgcaccgtcgttcgtcggcgctgccggtgttttcg
gtcaactgggacgcctggcgcgacgtgggcgccgcggccggcaaggacatgcccgagggc
atgggcctggacgagcgcaccggcgtgctggccttcgagcgcatcgtcaacgggcccgac
ctgccgcaggtcgtggtgtccgcatcgccgctcgcgccgcgcctgcgcccgcttcgcggc
ctgctggatgcgatggacgacgcgcccgaggccgccgcgcccgcgcgcgccggccatccg
cgtcccgtgctgcagacggctttcgtcgcgcccgaaggcgatctcgaagaggggctcgcc
gaactgtggaccgaggcgctcggcatcgcgcccgtgggcgtgaacgacaacctgttcgaa
ctgggcggcgattcgctgctcgccatccgcctgctgtcgaaggtgcgcaaggcctacggc
gtggacctggcgcccgccgtcttcttcaaggcgcccaccgtcgccgagctggctgcactg
gtcgagctgcggctgatcgaggacatcgaagcagccggcctcgacgacgaagccggcgag
acaggcgaaaagggccgggacggcgatcgcctcggccgcagcactgcgagttttccatca
tga
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