Variovorax boronicumulans: CKY39_24790
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Entry
CKY39_24790 CDS
T05068
Name
(GenBank) C4-dicarboxylate ABC transporter permease
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKY39_24790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_24790
Transporters [BR:
vbo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKY39_24790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ATA56100
UniProt:
A0A250DP39
LinkDB
All DBs
Position
5378876..5379874
Genome browser
AA seq
332 aa
AA seq
DB search
MALSRRQFVQAAAGTAAASTALFGTVSRAAAAKEFRLGLITPAGHSWNRAAVSFGEALKK
ATDGRLSATVFHSGQLGNESAMMQQLQSGALDMGWIQAAELGSRVASVAAINAPYLVRST
TNVASLVRTPAALKLLDVLPRETGTIGLGWGITGMRVVFATKDIASPTDLKGMKLRINPT
PVYRDFYQLLGAAPTPIPTPGVFDAMSNGQVDGLEADIEFSWNQRFDRVSKTLLPMNALF
MPFAPLVSGRIWQTLDAKDKALITDLVKQQLDAQIKDIVTTELGLIDKFKASGIAIKSAT
NYNPAPVIAEFDKVWLPKAPQIAELRKIGAAL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccctctcccgccgccagttcgtccaggccgccgccggcaccgccgccgcgtcgacc
gccctcttcggcaccgtgtcgcgtgccgccgccgccaaggaattccgcctgggcctcatc
acgcccgcgggccactcgtggaaccgcgccgcggtgagcttcggcgaagcgctgaagaag
gccaccgacggccgcctgagcgccacggtgttccactcgggccagctcggcaacgagtcg
gccatgatgcagcagctgcagtcgggcgcgctcgacatgggctggatccaggcggccgaa
ctcggctcgcgcgtggcgagcgtggcggccatcaatgcgccctacctcgtgcgctcgacc
accaacgtcgcctcgctcgtgcgcacgcccgcggcgctcaagctgctcgacgtgctgccg
cgcgagaccggcaccatcggcctgggctggggcatcaccggcatgcgcgtggtgttcgcg
accaaggacatcgcctcgcccaccgacctgaagggcatgaagctgcgcatcaaccccacg
ccggtgtaccgcgacttctaccaactgctgggcgccgcgcccacgcccattcccacgccg
ggcgtgttcgacgccatgtccaacggccaggtcgacgggctcgaagccgacatcgagttc
tcgtggaaccagcgcttcgaccgcgtctcgaaaaccctgctgccgatgaacgcgctgttc
atgcccttcgccccgctggtgtcgggtcgcatctggcagacgctcgatgcgaaagacaag
gcgctcatcaccgacctcgtgaagcagcagctcgacgcgcagatcaaggacatcgtgacc
accgagctgggcctcatcgacaagttcaaggccagcggcatcgcgatcaagagcgccacc
aactacaaccccgcgccggtcatcgccgagttcgacaaggtctggctgcccaaggcgccg
cagattgccgagctgcgcaagatcggcgccgcgctctga
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