Variovorax boronicumulans: CKY39_24845
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Entry
CKY39_24845 CDS
T05068
Name
(GenBank) lipid A hydroxylase LpxO
KO
K12979
beta-hydroxylase [EC:1.14.11.-]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CKY39_24845
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vbo01005
]
CKY39_24845
Lipopolysaccharide biosynthesis proteins [BR:
vbo01005
]
Lipid A
CKY39_24845
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Gene cluster
GFIT
Motif
Pfam:
Asp_Arg_Hydrox
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ATA56108
UniProt:
A0A250DP01
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All DBs
Position
complement(5388657..5389553)
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AA seq
298 aa
AA seq
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MKWVILAIFVLSALYVHFRGQVRHKFFRQLSDHSTFLAPLNVFMYLFSKVPGTPYLSPAQ
FPEMRILEENWEVIREEALAMRNGGSIKASSQFNDVGFNSFFKSGWKRFYLKWYDDAHPS
AAVLCPRTTELLKGIGTIKAAMFAELPPGSRLVRHRDPFAGSLRYHLGLWTPGVEGCYID
VDGQRYHWRDGEAVVFDETYIHYAENTTDHDRVILFCDIERPLKYRWASAVNRWFAKNLL
AAAASPNDAGDKTGGLNRAFKYIYQIRVIGKRLKAWDKRAYYLVKWTIFGGLALWIFW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggtcattcttgccatcttcgtgctcagcgcactctacgttcacttccgtggc
caggtccggcacaagttcttcagacagctctctgatcactcgaccttcctggcgccgctg
aacgtcttcatgtaccttttctcgaaggtgcccggtacgccgtacctgtcgcccgcgcag
ttccccgagatgcgcatcctcgaggaaaactgggaggtcattcgcgaagaggcgctggcc
atgcgcaacggcggcagcatcaaggcctcgagccagttcaacgacgtgggcttcaactcc
ttcttcaagagcggctggaagcgcttctacctgaagtggtacgacgatgcgcatccttcg
gccgccgtgctgtgcccgcgcaccaccgagctgctcaagggcatcggcaccatcaaggcc
gcgatgttcgccgagctgcccccgggcagccgcctcgtgcgccaccgcgacccgttcgcc
ggttcgctgcgctaccacctgggcctgtggacgccgggcgtcgaaggctgctacatcgac
gtggacggccagcgctatcactggcgcgacggcgaggccgtggtgttcgacgagacctac
atccactacgccgagaacaccaccgaccacgaccgcgtgatcctgttctgcgacatcgag
cgtccgctgaagtaccgctgggccagcgccgtcaaccgctggttcgcgaagaacctgctg
gccgccgccgcctcgcccaacgacgcgggcgacaagacgggtgggctgaaccgcgccttc
aagtacatctaccagatccgcgtgatcggcaagcgcctgaaggcctgggacaagcgcgcg
tactacctcgtgaagtggacgatcttcggcggcctcgccctctggatcttctggtga
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