KEGG   Variovorax boronicumulans: CKY39_25615
Entry
CKY39_25615       CDS       T05068                                 
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
  KO
K00240  succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
Organism
vbo  Variovorax boronicumulans
Pathway
vbo00020  Citrate cycle (TCA cycle)
vbo00190  Oxidative phosphorylation
vbo00650  Butanoate metabolism
vbo00720  Other carbon fixation pathways
vbo01100  Metabolic pathways
vbo01110  Biosynthesis of secondary metabolites
vbo01120  Microbial metabolism in diverse environments
vbo01200  Carbon metabolism
Module
vbo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vbo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vbo_M00149  Succinate dehydrogenase, prokaryotes
vbo_M00982  Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    CKY39_25615 (sdhB)
   00650 Butanoate metabolism
    CKY39_25615 (sdhB)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    CKY39_25615 (sdhB)
   00720 Other carbon fixation pathways
    CKY39_25615 (sdhB)
Enzymes [BR:vbo01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     CKY39_25615 (sdhB)
SSDB
Motif
Pfam: Fer2_3 Fer4_10 Fer4_8 Fer4_17 Fer4_7 Fer4_9 Fer4_16 Fer4_18 Fer4_4 Fer2 Fer4_2 Ric8
Other DBs
NCBI-ProteinID: ATA56237
UniProt: A0A1E7U534
LinkDB
Position
5551169..5551870
AA seq 233 aa
MKRTFQIYRYDPDKDAKPYMQTVEVELDGHERMLLDALMKLKAQDPTLSFRRSCREGVCG
SDAMNINGKNGLACLTNMNTLKGTVVLKPLPGLPVIRDLIVDMTQFFKQYNSIKPYLQND
TVPPEKERLQSPEEREELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADS
RDEATAERLDNLEDPYRLFRCHTIMNCVDVCPKSLNPTKAIGKIKELMVRRAI
NT seq 702 nt   +upstreamnt  +downstreamnt
atgaagcgcacattccagatctaccgctacgacccggacaaggacgccaagccctacatg
cagacggtcgaggtcgaactcgacggccacgaacgcatgctgctggacgccctgatgaag
ctcaaggcgcaggatcccacgctgtcgttccgccgctcgtgccgcgaaggtgtctgcggc
tccgacgcgatgaacatcaacggcaagaacggtctggcctgcctgaccaacatgaacacg
ctcaagggcaccgtcgtgctcaagccgctgccgggcctgcccgtcatccgcgacctgatc
gtcgacatgacccagttcttcaagcagtacaactcgatcaagccgtacctgcagaacgac
accgtgccgcccgagaaggagcgcctgcagtcgcccgaagagcgtgaagagctcgacggc
ctgtacgagtgcatcctgtgcgcgagctgctccacgagctgcccgagcttctggtggaac
cccgacaagttcgtcggcccggccggcctgctgcaggcctaccgcttcatcgccgacagc
cgcgacgaagccaccgccgagcgcctggacaacctggaagacccgtaccgcctgttccgc
tgccacacgatcatgaactgcgtggacgtgtgcccgaagagcctgaacccgaccaaggcc
atcggcaagatcaaggaactgatggtgcgccgcgccatctga

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