Variovorax boronicumulans: CKY39_25765
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Entry
CKY39_25765 CDS
T05068
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbo03019
]
CKY39_25765
03009 Ribosome biogenesis [BR:
vbo03009
]
CKY39_25765
03036 Chromosome and associated proteins [BR:
vbo03036
]
CKY39_25765
Enzymes [BR:
vbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CKY39_25765
Messenger RNA biogenesis [BR:
vbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CKY39_25765
Ribosome biogenesis [BR:
vbo03009
]
Eukaryotic type
90S particles
RNase
CKY39_25765
Prokaryotic type
rRNA processing factors
CKY39_25765
Chromosome and associated proteins [BR:
vbo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CKY39_25765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
PAZ_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ATA57913
UniProt:
A0A1E7U5X0
LinkDB
All DBs
Position
complement(5583203..5583889)
Genome browser
AA seq
228 aa
AA seq
DB search
MDGSLVALQARLQYTFSDPRLLQLALTHRSFSADHNERLEFLGDSVLNLAVSHLLYIRLS
ELPEGDLSRVRANLVKQDTLHRLALGLALSPLLRLGEGEARSGGPNRPSILADALEALIG
AVYLDAGFAAAQALVHRLYEAVEINPRMEAAAKDPKTELQEWLQGHKMKLPVYRVAATLG
AAHKQTFDVECEVPELGLRERGIGGSRRAGEQAAAAAMLIRLKARGAA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtggacggcagcctcgtcgcgctgcaggcgcgccttcagtacacgttctcggacccgcgc
ctgctccagctcgcgctcacgcaccgcagtttctcggccgaccacaacgagcgcctcgag
tttctcggcgactcggtgctgaacctggccgtctcgcacctgctgtacatccgtctctcg
gaactgcccgagggcgacctgtcgcgcgtgcgggccaacctggtcaagcaggacacgctg
caccggctcgcgctgggactggcgctgtcgccgctgctgcgcctgggcgaaggcgaagcc
cgctcgggcggcccgaaccggccctccatcctggccgacgcgctcgaagcgctgatcggc
gcggtctacctggacgccggctttgccgccgcgcaggcgctggtgcaccggctctacgag
gcggtcgagatcaatccgcgcatggaagccgccgcgaaagatccgaagaccgaattgcag
gaatggctgcagggccacaaaatgaagctgccggtgtaccgcgtggcagcgacgctgggt
gcagcgcacaagcagaccttcgatgtcgagtgcgaggtgcccgagctgggccttcgcgag
cgcggcatcggcggctcgcgccgcgccggcgagcaagctgccgcggccgccatgttgatc
cggctcaaggcacgcggcgccgcgtga
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