Variovorax boronicumulans: CKY39_26120
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Entry
CKY39_26120 CDS
T05068
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00550
Peptidoglycan biosynthesis
vbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKY39_26120 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vbo01003
]
CKY39_26120 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vbo01011
]
CKY39_26120 (pbpC)
Enzymes [BR:
vbo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CKY39_26120 (pbpC)
Glycosyltransferases [BR:
vbo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CKY39_26120 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
vbo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CKY39_26120 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ATA56318
UniProt:
A0A250DPL3
LinkDB
All DBs
Position
5667077..5669305
Genome browser
AA seq
742 aa
AA seq
DB search
MPLAFSFSSTARHTLAVVLLTAAAAPSAWALASFEEVKRDFRSSETAVLDRQGELLQRVR
TDPTVRRGQWTALADVSPALRAAMVLSEDKRFYEHSGVDWRAASAAAWGNLWNTRTRGAS
TITMQLAGLLDDDLRRAAGGRSFTQKIGQTVAATQLERRWRKDQILEAYLNTVPFRGEIV
GIDALSRTLFSKAPSGLDAREAAVAAALVRAPNARPALVAQRACEVLRVMEPGAKTDCEA
LDMFTSAVVQRRAFEPNEGIAPHAARRVLRELRDAGNDKATAPTSVRTTLRAPLQRYALD
SLQRHLRELRDRHVEDGALVVLDNASGEVLAWVGSSGPLSQAAEVDGVTALRQPGSTLKP
LLYAQALAEKRITAASLIEDSSAQISTASGLYIPQNYDRRFKGPVSARTALAASLNVPAV
RTLVMVSPEAFARELRAAGLPLRESGDYYGYSLALGSAEVSLLSLANAYRMMANGGRFGA
TTLTPRPAPATKAKPVEAAPLLDPRAAFIVSDILSDPNARTRTFGLDSILSTRFWTAVKT
GTSKDMRDNWAVGWSQRYTVGVWVGNASGASMWDVSGTSGAAPVWAEVMRFLHAREPSRA
PAPPAGLVEARVSFGPGADGSPLEAARSEWFLQGTEQPLFALDTGMASDAASARITAPAD
GTILALDPDIPPQRQRVRFESEGRGVQWRIDGKFHARGNSAQWLPWPGRHLIELVDASGK
VVDQRRVEVRGAGVVAAKGTRR
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgcgttctcgttttcttccaccgcccggcacaccctggccgtggtcctgctg
acggcagccgccgcaccctcggcctgggcgctggccagcttcgaggaggtgaagcgcgac
ttccgttcctccgagaccgccgtgctcgaccgccagggcgagctgctgcagcgcgtgcgc
accgaccccacggtgcggcgcggccagtggaccgcgctggccgacgtgtcgcccgcgctg
cgcgcggccatggtgctgagcgaggacaagcgcttctacgaacacagcggcgtcgactgg
cgtgccgcctcggccgccgcctggggcaacctgtggaacacgcgcacgcgcggcgcctcg
accatcaccatgcagctggcgggcctgctcgacgacgacctgcgccgcgcggcgggcggg
cgcagcttcacgcagaagatcggccagaccgtggcggccacgcagctggagcgccgctgg
cgcaaggaccagatcctcgaggcctacctgaacacggtgcccttccgcggcgagatcgtc
ggcatcgacgcgctctcgcgcacgctcttcagcaaggccccgagcgggctcgacgcgcgc
gaggccgcggtggccgccgcgctggtgcgcgcgcccaatgcccgccccgcgctggtggcg
cagcgcgcctgcgaggtgctgcgcgtgatggagcccggcgccaagaccgactgcgaggcg
ctcgacatgttcaccagcgccgtggtgcagcggcgcgcgttcgaacccaacgaaggcatc
gcgccgcatgccgcgcggcgggtgctgcgcgagttgcgtgatgcggggaacgacaaggcc
accgcccccaccagcgtgcgcaccacgctgcgcgcgccgctgcagcgctacgcgctcgac
agcctgcagcgccacctgcgcgagctgcgcgaccgccacgtggaagacggcgcgctcgtg
gtgctcgacaacgcgagcggcgaggtgctggcctgggtcggctcctcgggcccgctgagc
caggccgccgaggtcgacggcgtgaccgcgctgcgccagcccggctccacgctcaagccg
ctgctgtacgcgcaggccctcgccgaaaagcgcatcacggcggcctcgctcatcgaggac
tcgtcggcgcagatcagcaccgccagcggcctctacattccgcagaactacgaccgccgc
ttcaagggcccggtgtcggcgcgcaccgcgctggccgcctcgctcaacgtgccggccgtg
cgcacgctggtgatggtgtcgcccgaggccttcgcgcgcgaactgcgcgccgccggcctg
ccgctgcgcgagagcggcgactactacggctacagcctggcactcggcagcgccgaggtg
tcgctgctgtcgctggccaatgcctaccgcatgatggccaacggcggacgcttcggggcg
accacgctcacgccacgccctgccccggccaccaaggcgaagcccgttgaagccgcgccg
ctgctcgacccgcgcgccgccttcatcgtcagcgacatcctttcggacccgaacgcgcgc
acgcgcaccttcggcctggacagcatcctctcgacccgtttctggaccgccgtgaagacc
ggcaccagcaaggacatgcgcgacaactgggccgtgggctggtcgcagcgctacacggtc
ggcgtgtgggtcggcaacgcgagcggcgcctcgatgtgggacgtgagcggcaccagcggc
gccgcgcccgtgtgggccgaggtgatgcgcttcctgcacgcgcgcgaacccagccgcgcg
cccgcgccgcccgccgggctggtcgaggcgcgcgtgagcttcggcccgggcgccgacggc
agcccgctcgaagcggcgcgcagcgaatggttcctgcagggcaccgagcagccgctgttc
gcgctcgacaccggcatggcgagcgacgccgcctcggcgcgcatcacggcgccggccgac
ggcacgatcctcgcgctcgaccccgacattccgccgcagcgccagcgcgtgcgcttcgaa
tccgaagggcgcggcgtgcaatggcgcatcgacggcaagttccacgcgcgcggcaacagc
gcgcagtggctgccgtggccgggacggcacctgatcgaactggtggacgccagcggcaag
gtggtcgaccagcgccgggtggaggtgcgcggcgcgggcgtggtggcggccaagggcacg
cgccgatga
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